Lolium perenne (perennial ryegrass): 127341567
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Entry
127341567 CDS
T08650
Name
(RefSeq) FACT complex subunit SSRP1-A
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127341567
03036 Chromosome and associated proteins [BR:
lper03036
]
127341567
Transcription factors [BR:
lper03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
127341567
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
127341567
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
YL1
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
127341567
NCBI-ProteinID:
XP_051223394
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All DBs
Position
3:69234871..69240760
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AA seq
634 aa
AA seq
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MTDGHLFNNILLGGRTGTNPGQFKVNSGGLTWNRQGGGKTIRIDKDDIASVKWMKVPRAY
QLEFRIKDGLCYKFIGFREQDVSNLTNFMQKNMGISPDEKQLSVSGHNWGRVDIDGSMLT
FMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGANEKDSLMDMSFYVPTSNTQFI
GDENRNSAQLVWEALLKRIDGSSSEEAVVTFEGTAILTPRGRYAVELHLSFLRLQAQASD
FKIQYSSIVRLFVLPKSNNPHTIVVVTLDPPIRKGQTLYPHIVIQFETDTVVEKKIKLSR
ELLDDKYKDRLEESYQGLVHEVFVRALRGLSGSKVTRPGSFRSFQGGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGTVGASISSQYFDLLVKLINDQEHLFRNI
QRSEYHNLFNFINGKNLRIMNLGDGQGTSGGVADILMDTENAAGDAYIARIQNQAGDEES
DEEDEDFVLDKDDAGSPTDDSGGEESDASENGGQKEKLSKKEASSSKPPVKRKPKARDGE
GSEKRKPKKKKDPNAPKRAMMPFMYFSMAARPGVKESYPDLPPTEIAKKLGEMWQKMSSE
EKQPYVQQSQVDKKRYEKESAAYRAAAPVDVDSD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccacctcttcaacaacatcctcctcggaggccgcaccggcacgaatcct
ggccagtttaaagtgaattctggagggcttacatggaacagacaaggtggaggaaagacg
atcaggattgataaagatgatatagcttctgtgaaatggatgaaagtccccagggcatat
cagcttgaattcaggatcaaagatggcctgtgctacaagtttattggcttccgggaacag
gatgtaagcaacctgaccaactttatgcaaaagaatatgggcatctcaccagatgaaaag
cagttatctgttagtggtcataactggggaagggttgatatagatggaagcatgcttacc
tttatggttggttcgaagcaagcatttgaagtttctctagcagatgtctcacaaacccag
atgcaaggcaaaacagatgttctcttggagtttcatgttgatgatactactggtgctaat
gagaaagattcgctcatggatatgagtttttatgtacctacatcaaatacacaatttatt
ggagatgagaatcgcaattcagcccagctggtgtgggaggcattattgaaaaggattgat
ggctcttcttccgaagaggcagttgtcacctttgaaggaacagctattcttacaccaaga
ggacgatacgcggttgagcttcatctctcatttctgcggcttcaagcacaagctagtgat
tttaaaatccaatatagcagcattgtccgtctctttgttttgccaaagtcaaataatcct
catacaattgtggttgtgactcttgatccgccaatccgtaaagggcaaacactgtatcct
cacattgtcattcagtttgagacagatacagttgttgagaaaaaaattaaattaagcaga
gagcttcttgatgacaaatacaaagacaggctggaggaatcttatcagggtctagtacat
gaggtattcgtcagagcccttcgtggtctatctggttctaaagtcacaaggccagggtct
ttcagaagtttccaaggtggttatgcagttaaatcatcactcaaagctgaagatggactg
ttgtatccacttgaaaagggcttcttctttctgccaaagccccctacgctcattttacat
gaagagattgagtttgttgaatttgaacgccacggcactgtgggcgccagtatatcatct
cagtatttcgatctcctcgtcaagctaataaatgaccaagagcatctcttcagaaatatt
caaaggagtgaataccataacctttttaactttatcaatggaaagaacttgagaataatg
aaccttggagatggtcaaggtacaagtggtggggttgcagatattctaatggacactgaa
aatgctgctggtgatgcctatatcgcgagaatacaaaatcaggccggggatgaggaaagt
gacgaagaggatgaagactttgttctggataaggatgatgccggatctcctaccgatgat
tctggtggtgaggaatcagatgccagtgaaaatggtggtcaaaaagagaagttatccaaa
aaggaagccagtagttcaaagccacctgtgaaaaggaagcctaaggccagggacggtgaa
ggttcagagaaaaggaagccaaagaagaagaaagatcccaatgcccccaaaagagcaatg
atgccattcatgtatttctcaatggctgcgcggccaggagtgaaggagagctacccggat
ttgcctccaacagaaattgcaaagaagcttggcgagatgtggcaaaagatgtcatccgaa
gagaagcagccttacgttcagcagtctcaggtcgacaaaaaacggtacgagaaggaatct
gctgcctaccgtgctgccgccccagtggatgtggactccgactag
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