Lolium perenne (perennial ryegrass): 127341568
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Entry
127341568 CDS
T08650
Name
(RefSeq) FACT complex subunit SSRP1-A isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127341568
03036 Chromosome and associated proteins [BR:
lper03036
]
127341568
Transcription factors [BR:
lper03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
127341568
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
127341568
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
HMG_WDHD1
YL1
Motif
Other DBs
NCBI-GeneID:
127341568
NCBI-ProteinID:
XP_051223395
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All DBs
Position
3:69269938..69276135
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AA seq
507 aa
AA seq
DB search
MADGRLFDNILLGGSTGTNPGQFEASSGGLTWTRQGGGETIRIDKADITSVKWTKVPRAN
ELEVSTNDGLFYKFIGFPEQVLWEAILNGNDRLSCNEEAVVTFDGIAILTPRGRYGAELH
LSFLRLQGEANDFKIQYSTIIRLFVLPKSNNPHTLVVVTLDPPICKGKTLYRHIVIQFET
DTIVEKSMKLSRELLAQKYKGRLEESYQGLVHEVFVKALRGLSGARVTRPGSFRNSQGGY
AVKSSLKAEGGLLYPLERGFFFLPKPPTLIIDEEIEFVEFEHHGTGGASMSSLYFDLIVK
LKNDQVHLFRNIQRSEYHNLFNVIIAKNLKLMNLGDGQGTSGGVADILPETENAGGDLYM
PRMKNQAGDEESDEEDEDSVLDKDDGGSPTDDSGGEESDASESGCQNEKSSKKEASSSKP
PAKRKPKARDGEGSEKRKSKKKKDPKAPKRAVLPYKYFSMAARPGVEESYPDLPPTDISR
KLGEMWQKMSSKEKQPYIQQSQVDRKG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggccgcctcttcgacaacatcctcctcggaggcagcaccggcacgaatcct
ggccagtttgaagcgagttctggagggcttacatggaccagacaaggtggaggagagacg
atcaggatcgataaagctgatataacttctgtgaaatggacgaaagtgcccagggcaaat
gagcttgaagtcagcaccaatgatggcctgttctacaagtttattggcttcccggaacag
gtgctatgggaggcaatactgaatgggaatgatcgcttgagttgtaatgaagaggcagtt
gtcacctttgatggaatagctattcttacaccaagagggagatatggtgctgagcttcat
ctttcatttctgcggctccaaggagaagctaatgattttaagattcaatatagcactatt
attcgcctctttgttttgccaaagtcaaacaatcctcatacacttgtggttgtcacactt
gatcctccaatctgtaaagggaaaacgctgtatcgtcacattgtaattcagtttgagaca
gacactatcgttgagaaaagcatgaaattaagcagagagcttcttgctcaaaaatacaaa
ggcaggttggaggaatcttatcagggtctagtacatgaggtattcgtcaaagcccttcgt
ggtctatctggtgctagagtcacaaggccaggatctttcagaaactcccaaggtggttat
gcagttaaatcatcactcaaagctgaaggtggactcttgtatccacttgaaaggggcttc
ttctttctgccgaagccccccacgctcattatagatgaagagatcgagtttgttgaattt
gaacatcatggcactgggggagccagtatgtcatctctttattttgacctcatcgtcaag
ctaaaaaatgaccaagtgcatctcttcagaaatattcaaaggagtgaataccataacctc
ttcaacgttatcattgcaaagaacttgaaattaatgaaccttggagatggtcaaggtaca
agtggtggggttgcagatattctaccggagactgaaaatgctggcggtgatctctatatg
ccaagaatgaaaaatcaggcaggggatgaggaaagtgatgaagaggatgaagattctgtt
ctagataaggatgatggtggatctcctaccgatgattctggtggtgaggaatcagatgct
agtgaaagtggttgtcaaaacgagaagtcatccaaaaaggaagccagtagttcaaagcca
cctgcgaaaaggaagcctaaggccagggatggtgaagggtcagagaaaagaaagtcaaag
aagaagaaagatcctaaagcacccaaaagagcagtgttgccatacaagtatttctcaatg
gctgcacggccgggagtggaggagagctacccagatttgcctccgactgacatttcgagg
aagcttggcgagatgtggcaaaagatgtcatccaaagagaaacagccttacattcagcag
tctcaggtcgacagaaaagggtag
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