Lolium perenne (perennial ryegrass): 127341728
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Entry
127341728 CDS
T08650
Name
(RefSeq) uncharacterized protein LOC127341728 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127341728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127341728
03019 Messenger RNA biogenesis [BR:
lper03019
]
127341728
04121 Ubiquitin system [BR:
lper04121
]
127341728
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127341728
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
127341728
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127341728
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127341728
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127341728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
127341728
NCBI-ProteinID:
XP_051223618
LinkDB
All DBs
Position
3:65752968..65760367
Genome browser
AA seq
858 aa
AA seq
DB search
MSTQAKDKCPLCLETMDLTDKHLKPCKCGYEICLWCWHHIMEMDQKDECGGRCPGCRSIY
NKDRILETSTSNQILKELCADKSNLQQEQTKLQKQKPVKSQTRVVEEPIDPNVRVIQRKL
VYIIGMPSEFASEKVLRQKSFLGQYGKIENIIIDNIGANQQLPDSGRVYVTFSREEEAVL
CIESVNGYILDGRPLKATFGVTRYCHIWLSNKVCQKPNCSYVHYKALAEDICTKDDVGVF
CARLQHLLGMNMTGPQQRSGSTLPSPGGWNSKTTICTGNSKDKICISDGVVPRDVNKNTG
TLTAAILRDSVRPSCKPPSIVNAAPHRLNNHESVPSQQKKVSSKSPELPQLGPKSRPDEQ
LASSDDKSQASAHLGVSDSKQMASAINGTVETSWKKPHYANIVSQGSSAPSRRFTVLTRE
STSTDTRSKATGQEGIWVSKKLELLKDVHNDRIPRSQNLKVASQIPEEPLQRLINQLSSV
VVTSHTGAEKKSAHSHIKDTPAQGKDMQLSVNTAASSATVLQSISPTVLSSNLSTSDAKT
QTSVGTYKLPNSHRKLASESEHQILHQQKASVSDKDVASVSDCRSILSNQAVCSDGKCQT
SAQGGDHSSCPGKMTLSGDQTSSEQAESIRLTRPVSVLSSTDILAKDSKGRKSLVCPPGF
KVLHKSSDSGSSVSMSSSTCSALCSTSDAPVQESCSVTDQPDIISWVSECLDDGGDTRQS
NSVSIPSTLSPTDTIWRPTMLPGPSFGASNNCILPPYPGGMLQCMSGDQNPMICCCTFPS
VPNQMPEYWNGGASSYMAPGGYNTFYQNTASGMRTGMVGTLLQQPSPPGLYTDWTNGNAD
SGLNSAQVGHPYSVYSLF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccaagctaaagacaaatgtccactttgcttggagacgatggatttgacagat
aaacatctgaaaccttgtaaatgtggatacgagatatgtctctggtgctggcatcatata
atggaaatggaccagaaggatgaatgtggtgggaggtgccctggatgccgttcaatctac
aacaaggataggattttggagacgagcaccagcaaccaaatattaaaggaactttgtgct
gacaaatcaaatttgcaacaagaacaaacgaagcttcaaaagcagaagccagtgaagagt
cagacaagagttgtagaagaaccaatagatccaaatgtccgtgtgattcaaaggaagctt
gtgtatataatcgggatgccttctgagtttgccagtgagaaggtgctaaggcaaaagagt
tttcttggacaatatggaaaaatagaaaacatcattatcgacaacattggagctaaccaa
cagcttcctgactctggccgtgtatatgtcacattttcgagagaagaggaagctgtattg
tgcatagagtcggtcaatggttacatcttggatggcagacctttaaaagcaacctttggt
gttacaagatattgtcatatatggctaagcaataaggtttgccaaaagccaaactgttca
tatgtgcactataaagccctagcagaagatatttgtaccaaagatgatgttggtgtcttt
tgtgcaaggcttcagcatttgttgggaatgaatatgacgggtccccaacagcgttcagga
agtactttaccttctccaggtggctggaactcaaaaactaccatttgtactgggaactcc
aaagataaaatttgcatcagtgacggagtagtacccagggacgtcaacaagaatactggt
acactgacagcagcaattctacgggattcagttcgtccttcttgcaagccaccatccatt
gtaaatgcagctcctcatcggctgaataaccatgagagcgttcctagtcagcaaaagaag
gtttcctctaaatctccagaattaccacaacttggaccaaagagccgacccgatgagcag
ttggcttccagtgatgataaatcccaagcatctgcacatttaggagtttcagattcgaag
caaatggcctcagcaataaatggaacagttgaaacttcatggaaaaagccacattatgct
aatatagtttcacaaggatctagcgcaccgagtcgccgctttactgtactcactagggag
tcaacatctactgatacaagatctaaagccacaggacaagaaggtatttgggtttctaag
aaacttgaattgctaaaagatgtacacaatgatagaattcctagatcccagaatttaaag
gtagcttcccagataccagaggaacctctccagaggttaattaaccagctgtcctcagtc
gttgttacgtctcatactggagcagagaaaaagagtgcacactcacatatcaaggatact
ccagctcaaggaaaagacatgcagctttctgtgaacactgcagcatccagtgcaactgta
ttgcagagtatcagtcctactgtgctcagtagtaatctttcaacttctgatgccaagaca
cagacatcagttgggacatataagcttccaaattcacacagaaagttggcatctgagagt
gaacatcagatcttacatcaacaaaaggcatctgtttcagataaagatgtagcaagtgta
agtgactgccgtagcattcttagtaatcaagctgtgtgtagtgatggcaaatgtcaaact
tcagcacaaggaggggatcacagctcgtgccctgggaaaatgactctgtcaggagatcaa
acttcatctgaacaggcagagagcattcggttaacaagaccagtcagtgtcctatcttcc
actgatatattggccaaggatagcaagggaagaaaaagcttagtttgtcctcctggattt
aaggtgcttcacaagtcatctgattcgggcagttctgtatcaatgagctcctcaacttgc
tctgcgctgtgctctacatctgatgccccggtacaagagtcatgctctgttacagaccaa
ccagacataattagctgggtctcggagtgcctcgatgatggtggtgataccagacaaagc
aatagtgtgagcataccttccacactcagtcccactgataccatctggagacccacaatg
cttcctggccccagttttggtgcatcaaataactgtatattaccaccctaccctggtggc
atgttgcagtgcatgagtggggatcaaaatcccatgatatgctgctgcacttttccgtcc
gtaccaaatcagatgcctgaatattggaatggaggtgccagtagctacatggcccctggt
gggtataatacgttctaccaaaacacggcatcaggcatgagaactggtatggtaggcaca
ttgctccaacagccgtcgcctccaggcctctacactgactggactaatggaaacgcagat
tcaggcttgaatagtgcacaggttggccatccatactcagtgtactccctcttctga
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