Lolium perenne (perennial ryegrass): 127342073
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Entry
127342073 CDS
T08650
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127342073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127342073
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127342073
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127342073
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
127342073
NCBI-ProteinID:
XP_051223967
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Position
3:complement(105778718..105781410)
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AA seq
333 aa
AA seq
DB search
MDVDSVECLSLPDAAMDAADDVGLATLHPHLAASASSRPAPFPNPNAKGGGGGGGAGGMV
APGSSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALE
KVAESLELPCKYYTLGCPEIFPYYSKIKHEAMCSFRPYNCPYAGSECSVTGDIPYLVNHL
RDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA
FLRFMGDENEARNYSYSLEVGANGRKMVWEGTPRSVRDSHRKVRDSHDGLLIQRNMALFF
SGGDRKELKLRITGRIWKEQQTPDGACVPILCS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacagcgtcgagtgcctgtcgctgcccgacgccgccatggacgcggcggac
gacgtcggcctcgccaccctccacccgcacctcgccgcctccgcctcctccaggcccgcc
ccgttccccaatcccaacgccaagggcggcggcggtggcggcggcgcgggaggcatggtc
gcgccggggagcagcgtgcacgagctgctcgagtgccccgtctgcaccaactccatgtac
ccgccgatccaccagtgccaaaatggacacactttgtgttccacatgcaaagctagggta
cataatcgttgccctacttgccgacaagaactcggtgatatcaggtgcttggcactggag
aaagtagctgaatcgcttgagcttccctgtaagtactacaccttggggtgcccagagatc
ttcccatactacagcaagataaagcatgaagcaatgtgcagctttagaccatataattgc
ccctacgctggttctgagtgttctgtgaccggtgatatcccttaccttgttaaccatctg
agggatgaccacaaagttgatatgcacagtggctgcacattcaaccatagatacgtcaaa
tccaacccaagagaagtcgaaaacgccacctggatgctgacggtttttcactgttttggg
cagtacttctgcctacactttgaggccttccagcttgggatggcaccagtgtacatggcc
ttccttcgtttcatgggggatgagaatgaggcaaggaactacagttacagcctcgaggtt
ggtgccaatggcaggaagatggtatgggagggcacccccaggagtgtccgggacagccac
cggaaggtgcgggacagccacgatggcctcctgatccagagaaacatggcattgtttttc
tcagggggcgaccggaaggagctgaagctgaggatcaccggccggatctggaaggagcag
cagacaccggatggcgcctgtgtaccaattctctgtagctaa
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