Lolium perenne (perennial ryegrass): 127342278
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Entry
127342278 CDS
T08650
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03022
Basal transcription factors
lper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127342278
09124 Replication and repair
03420 Nucleotide excision repair
127342278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127342278
03400 DNA repair and recombination proteins [BR:
lper03400
]
127342278
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127342278
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127342278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
127342278
NCBI-ProteinID:
XP_051224173
LinkDB
All DBs
Position
1:complement(7523810..7525680)
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AA seq
70 aa
AA seq
DB search
MVNAIKGLFISCDVPMAQFIVNLNASMPASERFIVHILDPTHMFIQPHMGEYIRSKIAEF
RDQNSYEKPT
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggttaacgcaatcaagggtttgttcatctcctgcgatgtgccgatggcacagttcatt
gttaatttgaatgcttcaatgcccgcatcggagaggttcattgtgcacattcttgaccct
acacacatgtttatccagcctcatatgggagagtacatcagaagtaagatagcggagttc
agagaccagaatagctacgagaagccaacttga
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