Lolium perenne (perennial ryegrass): 127342280
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Entry
127342280 CDS
T08650
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127342280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127342280
03036 Chromosome and associated proteins [BR:
lper03036
]
127342280
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127342280
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127342280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
127342280
NCBI-ProteinID:
XP_051224175
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All DBs
Position
3:complement(123399704..123404249)
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AA seq
923 aa
AA seq
DB search
MFGSTNPFGQSSGSAFGQTSSNPFGAQSGFGQTSTPANNPFGSPTPAFGAPQTGAASPFG
ATPSAGAFGQPSAPAFGATSTPAFGAASTGGFGQPSTPAFGTPSSSPFGTSTPAFGASST
PAFGTASSSFGSGSLFGQKPSFGGFGSSPSQSSPFGGAFQQTQPAFGSTTFGATTTPAFG
TTPTPAFGATTTPAFGSTSTSLFGASSTPAFGSTPFGSTTTPAFGASGSTTAFGVSSAPA
FGASSTPSFGASTSAFSFGSSPSFGQTAAAAGTTPFGTTPSPFGAQTSPFGGQTTAPAFG
QASFGNQSGGTRVQPYAQTPDADSATSGQPAAKLNSISAMPAYKDKSHEELRWEDYQRGD
KGGPNTSAAPVANSFASPQPIFQANPTTPANPFAKASTGGFGATPNPFSSATIASFGQTS
SSAFSANTSPSLFGNTTTSLFSTPSTTTNPFNTGLSINNTQSAGLFQSSPAMTQQPFSQS
FNQQSSTPAFSTGMFNTSNPGMTGGLFSNTSSPFQTPTFPQSAPAQTPSLFSFPQTQQAS
AGGFSGVGGFSGVSNTLNLGQFGQQTTTQSNMVMQPTLISNPFGTLPAMPQMSIGNGGSS
PSIQYGISSLPVSEKPLPSRAVSMVVPRHLSQRRIKLLPRKYNQTSDGKVPFFADDEESS
VTPKADAFFIPRENPRSLVIRPTEQLRSHSAVDRQSIPSVTTDLGKQKDVLVSRERNKAS
MPPTGSDPVENGIYHDGHHNASNKPEAEARYVNGSSVDKLMPKLSQADYFMEPSLEELAA
KERAEPGYCCRVRDFVVGRQGYGSIKFLGETDVRGLDLESIVEFNNREVIVYKDDSKKPP
VGEGLNKAAVVTLLNIKCVNRKTNEQYTEGPRVDKYKEMLVKKAEEQGVEFISFDAVKGE
WKFKVKHFSSYGFAEAESGLVDS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaatccgttcggccagtcgtccggcagcgccttcgggcagacctcc
agcaaccctttcggggcccaatcggggttcggccagaccagcacccccgccaacaatccc
ttcggcagccccacccccgccttcggggcgccgcagaccggggccgcctcgccgttcggc
gccaccccctccgccggcgccttcggccagccctccgctccggccttcggggccacatcc
accccggcgttcggcgccgcgtcgaccggcggatttggccagccatccacgccggcgttc
ggcaccccgtcgtcctccccgttcgggacctccacgccggcctttggcgcgtcgtcaacc
cctgcgtttggcaccgcgtcctccagcttcggcagtggatctttgtttggacagaagcca
agttttggcggtttcggctcatctcccagccagtctagtcctttcggtggcgcattccag
caaacacaaccagcatttggcagtaccacttttggcgccacaactacgccagcctttggc
accacgccgacgccggcctttggtgccacaaccaccccagcatttggttcaacatcaaca
tccctattcggtgcttccagcacgccagcatttggttccacaccctttggttcaaccaca
actcctgcttttggagcttcaggttctaccacagcgtttggtgtgagtagtgctcccgct
tttggagcttcaagcacgccttcgtttggcgcatcaacaagtgcttttagttttggttct
tcaccgtcatttggacagacagcagctgcagccggtactactcccttcggaacaactcct
tcaccttttggggcacaaacttctccgtttggtggacagacaacagcgccggcgtttggg
caagcttcatttggaaatcaatctggaggaaccagagtacagccttacgcgcaaacacca
gatgctgacagtgctacaagtggtcaacctgctgcaaaacttaattctatatcagccatg
cctgcgtacaaagacaagagtcatgaagaattgaggtgggaagattaccagcgcggagac
aaaggtggaccaaacacttctgcagcaccagttgcaaacagctttgcgtctccacagccg
atttttcaagcaaatccaacgacaccagcgaacccattcgctaaggcctctacaggtggt
tttggtgctactccgaacccattttcgtcggccacgattgcctcatttggtcaaactagc
agttctgcattttccgcaaacacttcaccatctctgtttggaaatactactacttcacta
ttcagcacgccatcaacaaccacaaatccattcaacactggcttatccattaataacact
caatcagctgggctgtttcagtcttcacctgcaatgacgcagcagccatttagccagtct
tttaaccagcaatcaagcactccagctttctccactggtatgttcaacacatctaaccct
ggaatgactggagggctgtttagcaacacatcttcaccttttcaaacaccaacatttcca
caatctgcccctgctcaaacaccaagcttgttctcattccctcagactcaacaagcttct
gcaggtggattctctggtgttggaggattctctggtgtttccaacacactgaatctgggc
cagttcggacagcaaaccactacccagtccaatatggtcatgcagccaactcttatttcg
aatccctttgggacacttcctgcaatgcctcagatgtccattgggaatggtggatcctct
ccctctatccagtatggaatatcaagcttgccggtttctgagaagcctctcccgagcaga
gcagtatccatggttgttcctaggcatttgtcacagaggaggataaaactgttgccacgg
aaatataatcagacatctgatggaaaggttccattctttgctgatgatgaagaatcttct
gtgacaccaaaagcagatgcctttttcatccctagagagaacccgagaagtctggtaatc
cgtccaactgaacagttgcgttcacatagtgcggttgacaggcaatcaataccgagcgtt
acaactgatcttggcaaacaaaaagatgttttggttagcagggagcgcaacaaggcttcc
atgccaccaactgggtctgatccagtggaaaatggcatctaccacgatggccaccacaat
gcatcaaataagcccgaggctgaagcacggtatgtgaatggttcttctgttgacaagctc
atgcctaagctctcccaggcagattacttcatggagcctagtctagaggagcttgccgcc
aaagaacgtgctgaaccaggctactgctgccgggtgagagattttgttgtcgggcgccaa
ggctatggcagcatcaaattcttgggagagactgatgtaaggggccttgatctggagtca
atcgtggagttcaataaccgtgaagtgattgtgtacaaggacgacagcaagaagcccccg
gttggtgagggcctgaacaaagctgctgtggtgactcttctgaacatcaagtgtgttaac
aggaagacaaacgagcagtacacggagggtcctagggtggacaagtacaaggagatgctg
gtgaagaaagctgaggagcagggcgtggagttcatctcgtttgacgctgtcaagggtgag
tggaagttcaaggtgaagcacttcagctcctacgggtttgctgaagctgaatcaggcctg
gtcgattcctag
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