Lolium perenne (perennial ryegrass): 127342732
Help
Entry
127342732 CDS
T08650
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C
KO
K07466
replication factor A1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03030
DNA replication
lper03420
Nucleotide excision repair
lper03430
Mismatch repair
lper03440
Homologous recombination
lper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127342732
03420 Nucleotide excision repair
127342732
03430 Mismatch repair
127342732
03440 Homologous recombination
127342732
03460 Fanconi anemia pathway
127342732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127342732
03032 DNA replication proteins [BR:
lper03032
]
127342732
03400 DNA repair and recombination proteins [BR:
lper03400
]
127342732
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127342732
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127342732
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127342732
MMR (mismatch excision repair)
127342732
DSBR (double strand breaks repair)
HR (homologous recombination)
127342732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
zf-CCHC
tRNA_anti-codon
zf-CCHC_2
zf-CCHC_5
DUF223
DUF936
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
127342732
NCBI-ProteinID:
XP_051224702
LinkDB
All DBs
Position
1:complement(8539651..8543597)
Genome browser
AA seq
947 aa
AA seq
DB search
MDAPPPLAAGAVKEIAELPNGPGTTQPVLQAADVRPVTAKGAAAGVQQSERFRMLVSDGV
HSLQSMLSTDLNHLVRDGTLRPGSIVQLMDIMCNTIQGRRIIIVCKLDVLRSECAIIGKP
KLYETKTVREGQEPNLQANAVAPRVEQFPNNLPYGGPSNGVHSTGGSSIGRTIEHGPNNV
LSGGSYGTMSAQNTMNANVVQPNAQRPLLNPQQNTMNANVVQQNSQRPLLNSHQNQRFAG
SGTGGYSGPPGNIYMRPAQPSYQQPPPVGTGGYSGPPGNTYMRPVQPSYQQPPPVYRNSG
PAAKNEAAPRVVPISALNPYQGIWTIKARVTAKTHVHHYVNGRGPGKLFTFDLLDAHGGE
IRAKCFNEVVDKFCDLIEVDKVYLLSRGGLKPAQKQYNHLNNDYEISLDATTSIEVCSSD
DSSIPRQQFNFQQISEIANMDKGATVDLLAVVTSVSPSFPVMRKNGMETQKRMVELKDMS
GCSVETTFWGNFCDAEGQQLQLLCDSGSNPILALKSGLVGDFNGKSVGTISSSSLKINPD
FPDAEKLRQWYMTEGKNAAFSSLSGRMSGTGRTDVRKTVAQIKDEGLGRSEKPDWITVMG
AISHIKTDSFCYPACTVEVNGTRCNKKVTNNGDGMWQGEKCDHSSQDCEYRYVMQCRIQD
HTGTTYATAFQEAGEEILGLTAQDLFRIKNEDEVQFAGIIQGVSFQQYLFKLKVKEETFN
DEARLKANIVKAQKLDDTSKNSCSLLGAIESLLVEEDGSGSTPGANGAAAINPGTTSNNN
HAMNAQTCAVCGSNEHSVQNCPAVAMDMQQPAASGFTASSYGSSAGYANASSGLCFKCNQ
PGHYSSNCPGQAISYGYSGGNANARSDLCFKCHQPGHFSSNCPGQAAISYGSSGGNTNAR
SDLCYKCNQPGHFAKDCVAQTAAPQRQSYGNSTTSGGYNRQSYVGSF
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgccgccgccgctggccgcgggcgcggtgaaggagatcgcggagctgcccaac
ggccccggcacgacccagccggtgctgcaggcggcggacgtgcggcccgtgaccgccaag
ggcgcggcggcgggggtgcagcagtcggagcggttccggatgctcgtctccgacggcgtc
cactcgctgcagtccatgctctccaccgacctcaaccacctcgtcagggacggcaccctc
cgcccaggctccatcgtccagctcatggacatcatgtgcaacaccatccagggacgcagg
atcattattgtttgcaaacttgatgttctgcgaagtgagtgcgccatcattgggaagcca
aagctttacgagacgaagaccgtacgtgaaggccaggagcctaacttacaggctaatgct
gttgccccaagggtggagcagtttcctaacaatctgccgtatggtggaccctccaatggt
gtccacagcacagggggctcttctattggtcggacaatcgaacatggacctaacaatgtg
ttgtctggtggatcttatggtacaatgtcagcacaaaacacaatgaatgccaatgtggtg
cagccaaacgctcagcggcccttactgaaccctcaacagaacacaatgaatgcaaatgta
gtgcagcaaaactctcagcggcccttactgaactctcaccaaaatcaaaggtttgcgggt
tctggtacaggtgggtactctggccctcctggcaatatttatatgcgtcctgcacagcct
tcgtatcagcagccacctccagtaggtacaggtgggtactctggccctcctggcaatact
tatatgcgtcctgtacagccttcgtatcagcagccacctccagtatatagaaatagcggt
ccagctgctaagaatgaagctgcccctcgtgttgtcccgatttctgcattgaacccatac
caaggtatatggacaataaaggctagggtgactgcaaagactcatgtccatcactacgtc
aatggaagaggtccaggaaaactcttcacctttgatctccttgatgcacatggtggagaa
attcgtgcaaaatgctttaatgaggttgttgataagttctgtgacctaattgaggttgat
aaggtgtatttgctatctagaggggggttgaaacccgcacagaagcagtataaccatttg
aacaatgactatgaaatcagtctggatgctacaacatctatagaagtttgttctagtgat
gacagcagcatccctaggcagcagttcaatttccaacaaatcagtgaaatagcgaacatg
gataaaggagccacggtagatttacttgcggttgttacttcggttagcccttcttttcca
gtaatgcggaagaatggtatggaaacccagaaaagaatggtcgaactgaaggacatgtct
ggttgcagcgtggaaacaaccttctggggtaacttctgtgatgctgaaggtcagcagctg
cagttgctgtgtgattctggttcaaatcctatacttgccctgaaaagtggccttgtcggt
gatttcaatggaaaatcagtgggcacaatcagctcaagctccttaaaaataaatccggac
tttcctgatgcagaaaagctgaggcagtggtacatgactgaaggcaaaaacgctgctttc
agttctttgtctgggagaatgtcaggcacaggcaggactgatgttcgaaaaactgttgct
cagatcaaggatgaaggcttggggagatcagagaagcctgattggatcactgttatgggt
gcaatttcacacatcaagaccgacagtttttgttaccctgcttgcaccgtggaggttaat
ggtacgcgctgcaataaaaaggtcacaaataatggtgacgggatgtggcaaggcgagaaa
tgtgatcacagctctcaagattgcgaatataggtatgtgatgcagtgtcgaatccaggat
cacactgggactacctatgcaactgctttccaagaggctggcgaggagatccttggcctc
acagcgcaagatcttttcaggataaaaaatgaagacgaagtacaatttgcaggaatcata
cagggtgtttctttccagcagtatctcttcaagctgaaagtcaaggaagaaacatttaat
gacgaagcacgtctgaaagccaacatcgttaaggctcaaaaattggatgacacatcgaaa
aatagttgttctcttttgggagcaattgagagcctgttggtggaggaggacggctcaggc
tcaactcctggggcgaatggtgctgctgctattaaccctgggaccacctccaacaataac
catgccatgaatgcacagacttgcgctgtctgtgggtccaatgagcacagtgtgcagaac
tgccctgcggtggccatggatatgcagcaaccagcagcaagcggcttcacggctagttcc
tacggttcctcggctggctatgccaacgctagttcaggcctgtgcttcaaatgcaatcag
cctggacactactctagcaactgcccagggcaggccatctcctatggttattcaggcggc
aatgccaacgccagatcagacttgtgcttcaaatgtcatcagcctgggcacttctctagc
aactgcccagggcaggcagcaatctcctacggctcttcaggtggcaacactaatgccaga
tcagacttgtgctacaaatgcaatcagcctgggcacttcgccaaagactgtgtggcgcag
actgctgccccccagcgccagagctacggaaatagtaccacgtcaggaggatacaacagg
cagtcctatgtcggtagtttctga
DBGET
integrated database retrieval system
