Lolium perenne (perennial ryegrass): 127342934
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Entry
127342934 CDS
T08650
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127342934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lper03400
]
127342934
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
127342934
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
127342934
NCBI-ProteinID:
XP_051224917
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Position
3:191606812..191611719
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AA seq
1213 aa
AA seq
DB search
MPRQSVEIRRRRALILNDGDDDDGGGRAGEAGAGGAPSSSSQPVAAARGPEIIDIDDDDE
EEEEGAEVVADAEVQLGEGGGLVVKEEPPTDSDSGDVDWDELERLYPSDEERSGKASYAG
GRRSGGPTGSPGGEVNGATSTSGGASTGRQEGACEVAGEAEEMDLEDDDGAEEGQQDHQE
EEDKDEEYEVEEEEDDDDEETEEDEAGDEESEAGEGPGRRGVPSSARAAAGDSATEVFLR
RKFEGWLISRVADTANDAGSTVAARTRSRRRCPNRKLLRRGTCSKPYCVDTASSESAWES
SESEKAPPRAPAPSSSEEREPGAGGRGSYRRTVTGKRRRRGMKPAHGDDGSDSGGGQGVA
AKRRGKYMKNNAELGGGGGEDRGTAARRRGKRAMEPDAAADGHGDDDESDGPFASSRKPK
GAYAFKNKDGFGDVTFKNSSLVIPRGQGRRERETYDDLLDTIFEGIENYHNGSAPPDASV
PPAQGQGCDTLSLIFSFGDEEEVVVEKTEHEEFVDELFADWDNLVLEEQQQYNDDAAHTH
DKDEKSNMDGILADGATSCRCKPGKHVLFLDDQIGIRCKICDYIEMEIRDVFPAMMKDFA
DREPAADRELDLLFDDILKSIGHEGASDVGGHKTGVVWDLIPGVREDMFPHQQEGFEFMW
KRLAGGIDIEQLKQTMNSDTTSGCVISHAPGTGKTRLAITFVQSYLEIFPHCRPVIIAPR
GMLATWEQEFRKWKVKLPFHVLSSSDIQWSEDKTIQKLVSRDESLRHKLSANKLSQKSTL
MLKLASWYEGSSIIGLSYSLYRNLAKGEGADGKTVRNLLLEKPGLLVLDEGHTPRNKKSL
IWKVLAEVSTEKRIILSGTPFQNNFLELYNILCLVKPKFARDFACTRLSKKGQSRAAPHV
EEDEGKEFWTSLRIGNITDEHIREIREKLDPFVHIHNGDILQKSLPGLRESVVILNPLPR
QKEIIAMMEKSAGKGFLDAEYKISLASIHPFLVTGTKLSDEEASIVEKMQSVRLNPSEGV
KTWFVLEIVCLCEALKERVLVFSQYLEPLALIMDQLTRKFKWTEGREILLMSGNVRVKQR
EALMEAFNDMNSEAKVMLASTKACCEGITLVGASRVVLLDVVWNPSVGRQAIGRAYRIGQ
EKIVYTYNLIAEGTKEKVKYDRQASKDHMSKLLFSNELQPTGSNQAQEMFSDRVLETMTG
REDLKDMFVQISH
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggcagtccgtcgagatccgccgccgccgcgcgctcatcctcaacgacggtgac
gacgacgacggcggcggccgagcgggggaggctggcgcgggcggcgcgccgtcatcctcc
tcgcagccggtcgctgcggcgcgcggccccgagatcatcgacatcgacgatgacgacgag
gaggaggaggagggggcggaggtagttgcggacgctgaggtccagcttggcgagggcggg
gggcttgtcgtcaaggaggagcctcccactgattccgactccggcgacgtggactgggac
gagctcgagcgcctctacccaagcgacgaggagcgcagtggcaaggcgagctatgctggg
ggtaggaggagcggcggccccactggctctcccggcggcgaagtgaacggtgcgactagc
actagcgggggggccagcacgggtcggcaagaaggtgcttgtgaggtagcaggcgaagcg
gaggagatggatctggaggatgacgacggtgcagaggaggggcaacaagaccaccaagag
gaagaagataaagatgaagagtacgaggtggaagaggaggaagacgacgacgacgaagaa
acggaagaagatgaggcgggcgacgaggaatctgaggcaggggaaggaccgggccgtcgc
ggcgtgcctagcagtgccagggcggccgccggcgacagcgccacggaggtcttcctgagg
cgcaagttcgaagggtggctcatctccagggtagcggacaccgccaatgacgccggcagc
accgtcgcggcacggacgcggtcacgtcggaggtgccccaacaggaagctgctcaggcga
ggcacctgcagcaagccgtactgcgtcgacacggcgtcgtcggagtccgcctgggagtcg
tcagagtcagagaaggcgccacctcgtgctccagcgccgtcgtccagtgaggagcgtgag
ccgggtgccggcggccgcggcagctaccgcagaacggtgacagggaagagacggcgccga
gggatgaaacctgcccacggggatgacggctctgattccggtggtggtcagggagtggcg
gccaagaggaggggaaagtacatgaaaaataatgctgaactcggcggtggtggcggcgaa
gatcggggaacggcagcaaggaggaggggcaaacgggccatggaacctgatgctgctgct
gatggacatggggacgacgatgagtcggacggaccctttgcatcttccaggaagccaaaa
ggagcctacgccttcaagaacaaggatggattcggcgatgttaccttcaagaatagctcc
ctcgtcattccgagggggcagggccgcagggagcgagagacctacgacgatctgctcgac
accattttcgagggaatcgagaactaccacaacggctctgctcctccggatgcctctgtt
cctcctgcacaaggacagggatgcgacacgttgtctttgatcttctcattcggggatgaa
gaagaggtggtggtagagaagacagagcatgaagagtttgtggacgagctgtttgcagac
tgggacaacctcgtcctcgaggagcaacagcaatacaacgatgacgctgcccatacccac
gacaaggatgaaaagagcaatatggatggaattcttgctgatggagcaacttcatgcaga
tgcaagccagggaaacatgttctctttcttgatgaccaaataggtattagatgcaaaatc
tgcgattatattgaaatggaaattagagacgtattccccgctatgatgaaggactttgcg
gacagggaaccggcagctgaccgggagttggacttgctctttgatgatatcctaaaatca
attggacatgaaggagcgagtgacgtcggtggtcacaaaactggcgttgtctgggatctc
attcccggggtacgcgaagacatgtttccacaccagcaggaaggctttgagttcatgtgg
aaaagacttgcagggggaatcgacattgaacagctgaagcagaccatgaacagtgatact
acaagtggctgtgtgatttctcatgccccagggaccggcaagacccggctagcaattaca
tttgtgcaatcttacctggagattttcccgcactgcaggccagtgataattgctcccagg
ggtatgctggctacatgggagcaggagttcagaaaatggaaggtgaagctccctttccat
gtgctgagttctagtgatattcagtggagtgaagacaagaccatccagaaactggtttca
cgagatgaaagtctgcggcacaagttgtctgcgaacaaactgagccagaaatctacgcta
atgctgaagctggcatcctggtatgaaggcagcagcatcattggtctgagctactcgctt
tacaggaatcttgccaagggtgaaggcgccgacgggaaaacggtgaggaatcttcttctt
gagaagcctggcttgttggtcctcgatgaggggcacacaccaaggaacaagaagagccta
atctggaaagtccttgcagaagtcagcaccgaaaagcggataattctatcagggactcca
ttccagaacaacttcctagagctctataacatcttgtgccttgttaaaccgaaatttgca
agggattttgcttgtacaagactcagcaagaaaggacaatcaagagcagcacctcacgtg
gaggaggatgaaggcaaggaattctggacttcactgaggataggtaacataacagatgag
catatccgtgaaatacgggaaaagctggacccttttgtgcacatacataatggtgacatt
cttcagaagtctcttcctggactgagagaatctgttgtgattctgaaccctcttccccgt
cagaaggaaatcatcgcaatgatggagaaaagtgcagggaagggttttcttgatgcagaa
tacaagatatctcttgcatccatacacccgttccttgtcacgggcacaaaactgtcagac
gaagaagcatctattgtggagaagatgcagagtgtacggctgaacccaagcgaaggagtc
aagacatggttcgtcctggagattgtctgtctttgcgaagcattgaaagaaagagtgctc
gtgttcagccagtaccttgaaccactggccctgatcatggatcagctgaccagaaagttt
aaatggactgaaggcagggagatactgttgatgagtggaaatgtgcgtgtgaaacagcgc
gaagccttgatggaagccttcaatgacatgaacagcgaggctaaggtgatgcttgcatca
accaaggcctgttgcgaaggcataactcttgttggtgcatcgcgtgtcgttctcctcgat
gtcgtgtggaatccttctgttggaaggcaggcgattggccgagcctatagaatcggtcag
gagaagattgtgtatacatacaatctgatcgcggaaggaacaaaggagaaggtcaaatat
gacagacaagcttcgaaggatcacatgtccaaactactgttttcaaatgaactgcagcct
acagggagcaaccaggcacaagaaatgttcagtgacagggttttggaaactatgactgga
cgcgaagacctcaaagacatgtttgtgcagatttcgcattga
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