Lolium perenne (perennial ryegrass): 127343394
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Entry
127343394 CDS
T08650
Name
(RefSeq) phragmoplastin interacting protein 1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127343394
03036 Chromosome and associated proteins [BR:
lper03036
]
127343394
Spliceosome [BR:
lper03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127343394
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
127343394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_6
zf-CCHC_3
RRM_7
RBD_DEAH11
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127343394
NCBI-ProteinID:
XP_051225487
LinkDB
All DBs
Position
1:14879997..14883803
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AA seq
668 aa
AA seq
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MGRYGPAHVGPYQPGPSINLAVWPSASATRAKTSAAASSSAAAAAMVLARKKLKQRIRTL
LPGGDAEAGAGAEVKKLKVRLVSSKRARPKRPKKPTPAPVVVEEEGEAEKEVEEEQSDEE
PAVDEAALALKAEVERRREERRKEKKEKRRVRRLLEAEAAASKKPDAEEAAVDQESEVAG
ADPAVPDDSEHNIDIAVVEEKANNLDIAKVEGKVVKIKLEEASQEAGSDNPIVSHDSGQS
IKKVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPESGKFRGIAILTFKTDGAAQRAL
ALDGADMGGFFLKVQPYKANREKVKSNHEKEDFAPKMIEGYNRMYVGNLAWDITEDDLRR
FFSDCKISAIRFGTDKETGEFKGFAHIDFSDSTSLAVAMRLDQNVIKGRPVRIRCAVPKK
ETQKSDDNANSDSSKNKIRTCYECGTPGHLSFACPNKKASEVEPSEKKANVDSAEASSKK
RRTCYECGVPGHLSSACPNKKASESEAIGDENKANIGTATTSSKKRRTCYECGVPGHLSS
ACPNKSAAEVVSNTQTFDEPKIAPSIAYEQNKIGDGSNSAPSKRRKCYECGISGHLSSAC
PNKKATETNFDEAKSVGDSSTLPATTSGEKKSSDDTSSAPPKKKKRRTCYECGIAGHLSS
ECPNKAAA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttatgggccggcccacgtgggcccgtaccagcccggcccaagtataaacctt
gccgtgtggccgtctgcctctgccactcgagcaaaaacctcagccgccgcctccagctcc
gccgccgcagcagccatggtgctggcgcgcaagaagctgaagcagaggatacggacgctg
ctccccggcggcgacgccgaggcgggggccggcgcggaggtgaagaagctgaaggtgcgg
ctggtgtcctccaagcgggcccggcctaagcgtcccaagaagccgacgcccgcgccggtg
gtggtggaggaagagggggaggcggagaaggaggtggaggaggagcagtcggatgaggag
ccggcggtggacgaggcggcgctggcgctgaaggcggaggtggagcggcggagggaggag
aggaggaaggagaagaaggagaagaggagggtgaggaggctgttggaggcggaggcggcg
gcgagcaagaagcccgacgcggaggaggcggcggtggatcaggagtcggaagtggccggc
gctgatcctgccgtgccagacgatagtgaacataatatagacatcgcagtagtggaagaa
aaggcgaacaatctagatatcgcaaaggtggagggaaaggtggtgaaaattaagttagaa
gaggcaagccaggaagctggatctgacaatccgattgtgtcgcacgatagtgggcaaagt
ataaagaaggtgtatgttggtggcatcccatactattcatctgaggatgacattagaagt
ttctttgaaggatgtggcagtatcactgcactggactgcatgacttttcctgagagcggg
aaattcaggggtattgccattctcacattcaagactgacggggctgcacaaagggcatta
gctcttgatggtgcagatatgggaggattctttttgaaagtccagccttacaaagctaac
cgggaaaaagtcaaatctaaccatgagaaggaagactttgcaccaaagatgatagaggga
tacaataggatgtatgttggaaacctagcgtgggacataacagaggatgacctgaggagg
ttcttttctgattgcaagatctcagccatccgattcggaacagacaaggagacaggtgaa
ttcaaaggctttgcacatattgatttttctgatagtacatctcttgccgttgctatgagg
cttgaccagaacgtgattaaggggagaccagtcagaattagatgtgccgttcccaagaaa
gaaacccagaaatcagatgacaatgcaaactcagattcatcgaagaataagatccgtaca
tgttatgagtgtggtactcctggccatctctcttttgcttgccctaataagaaggcttct
gaagtggaacctagtgaaaagaaggctaatgttgattcagctgaagcatcgtcgaagaag
agacgcacgtgctatgaatgtggcgttcctggccatctatcatcagcttgccccaacaaa
aaggcttctgaatctgaagccataggtgatgaaaataaggctaatattggcacagccaca
acatcatcaaagaagaggcggacatgctatgaatgtggcgttcctggccatctgtcatct
gcttgcccaaacaaaagtgctgctgaggttgtttctaacacacagacttttgatgaacca
aaaattgcaccttcaattgcttatgagcaaaataaaataggcgatggatcaaattcagca
ccttcgaagaggaggaagtgttatgaatgtggcatctctggtcatctttcgtcagcttgc
cccaacaagaaggctactgaaactaatttcgatgaagctaaatctgttggtgactcaagt
acattacctgctaccacttctggtgaaaagaagtctagtgacgatacaagttcggcgcct
ccaaagaaaaagaagagaaggacgtgctatgaatgcggaatagctggtcatctctcatca
gaatgccccaacaaggcagctgcttag
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