Lolium perenne (perennial ryegrass): 127343771
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Entry
127343771 CDS
T08650
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lper03016
]
127343771
Enzymes [BR:
lper01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
127343771
Transfer RNA biogenesis [BR:
lper03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
127343771
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
BDM
Motif
Other DBs
NCBI-GeneID:
127343771
NCBI-ProteinID:
XP_051225921
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Position
1:complement(20821521..20828617)
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AA seq
778 aa
AA seq
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MMRPSPMAARAASGCSTAAVAFFRLRPLGRAARPAPAPAPARRFAFSGTAACRGRLVDSV
LQELRSRRPVRVSARIGLQGTKELSDSKIDKKTLRKGLLLEFVKDSERSLLAVVERPDGK
KNWVVTDQNGILSSIKPQQVTYVVPGTIDFDCSRIAEFLEKAQDLLDPTILECAWMELSE
KDKSVTVEEFADIVYGSKESLESYCAHFLLSRDIVYFVKVDNRGSSTYQPRPSAQVDELI
RRKLSKEAADKELEEFVDLLKSAKALPLDSKPSKNSWLMEEKVKQKIESLQAYAVDACND
AQRRMAGNILKALGFSRTSSAALKLLINVGYFPVHVNLDLFRYDVQTTYSEEVLSVAEEL
LADCPDSDKHIRKDLSNLRVYAIDVDEADELDDALSATRLPDGRIKVWIHVADPTCFLQP
RSIIDREAMHRGTSIFLPTATYPMFPERLAMNAMSLQQGIDCRSVSVSVTLHPDGSIAEY
AIANSVIKPTYMLTYEGATELLYMNLEEEEDLRILQEAASIRAQWRCSQGSIDTSMIEPR
IKVANPDDPEPNINLYVEDQTNPAMQLVTEMMILCGEAVAAFGADNNIPLPYRGHPQSST
AVSAFAYLPEGPARSVANISVLRAAEMDFRKPVAHGVLGVPGYVQFSSPIRRYVDLLAHY
QVKAFLRGESPPYSAGDLEGMTFIATMHVKVARRLHSNSLRYWLLEYLRRQPKGRKYKAL
ILRFMKDRMATLLLLDVGIQVTTMVAAGKVGDGATVVVEMVHPRDDILSVTEIPEDTE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggccgtcgcccatggcggcgcgggcggcgagcgggtgctccacggcggcggtg
gccttcttccgcctccgtcccctcggccgcgccgcccgccccgctcccgctcccgccccc
gccaggcgcttcgctttcagcggcaccgccgcctgccggggccgcctcgtcgactccgtc
ctccaggagctccggtcccggaggcccgtgcgggtctcggcaaggatagggttgcagggc
acaaaggaactgtcggacagtaagatagacaagaaaacattacgaaaaggtttgctgctt
gaatttgtcaaagattccgagagatccttgctcgcagttgtagaaaggcccgatggcaag
aaaaactgggtagtgactgaccagaatggtatcctgtcgtctataaagccccagcaggtt
acatatgtcgtacctggtaccatagatttcgattgctcaagaatagctgaatttctggag
aaagcgcaagaccttttggatcctactattttggaatgtgcctggatggagctttctgag
aaggacaaatcagtaacagttgaggagtttgcagatatagtatatggtagcaaggagtct
ttggaaagctactgtgcacacttcttgttatcacgggatattgtctattttgtgaaagtg
gacaacagaggttcgtccacatatcagcctcgaccgtctgctcaggtggatgaacttata
cgaaggaagctttctaaagaggctgccgataaggaactagaagaatttgttgacctactc
aagtctgccaaagcattgcctctagactctaagccttctaaaaattcatggttgatggaa
gagaaagtgaaacaaaaaattgagtcccttcaggcatatgcagttgatgcatgtaatgat
gcacaaagaagaatggcgggaaatattctcaaggctctggggttctcacggacttcatca
gctgccctaaagcttctcataaatgttgggtacttccccgtgcatgtcaaccttgatctt
ttcagatacgatgttcagaccacatatagtgaggaagtcttgtctgttgctgaggagctt
ctggcggattgccctgattcagataagcatatccggaaggatctttcaaatttgagagtg
tatgccattgatgtggatgaggctgatgaacttgatgatgcactaagtgcaactagacta
cctgatggtaggataaaagtctggatacatgtagctgacccaacatgctttcttcaaccc
cggagcatcattgacagggaagccatgcacagaggaacctcgatatttttaccaactgcc
acctatccaatgtttccagagaggcttgccatgaatgctatgagcttgcaacagggtata
gattgtagatctgtaagtgtatctgtgactttgcatccagatggaagtattgcagaatat
gcgatagcgaactcagtaatcaaacctacgtacatgttaacgtatgagggtgcaactgaa
ttgctctacatgaatctggaagaagaggaagacctaaggattcttcaagaagctgcttct
attcgtgcgcaatggcgttgtagccaaggttcaatcgacacttctatgatagaacctcgt
atcaaggtggcaaatcctgacgatcctgaaccaaacattaacctatatgttgaagaccaa
accaacccagcaatgcagcttgtaactgagatgatgatactttgcggggaggcggtagct
gcttttggtgctgacaacaatattcctttgccatacagagggcatccccagtcaagtaca
gctgtgtcagcatttgcctatctacctgaagggcctgccaggagcgttgccaatatcagt
gtacttcgtgctgcagaaatggatttccgaaaacctgtagcacacggtgtcctcggagtt
cctggttatgtacagttctcctcccccattcgaagatatgtcgatctgctagcacattat
caggtaaaggcgtttcttagaggtgaatctccaccatattcagctggtgacctagaagga
atgacatttattgcgaccatgcatgttaaagtagctaggaggctccatagcaacagttta
cgttactggttgctggaatacttaaggagacagccaaaggggaggaagtataaagcactg
atacttaggttcatgaaggatcgtatggcaactttgcttttgttggatgtcgggatccaa
gtcacaaccatggttgcagcagggaaagtgggagacggagctactgttgttgtggaaatg
gttcatccccgtgacgacatcttatcagttacagagattccggaagatacggagtaa
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