Lolium perenne (perennial ryegrass): 127344026
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Entry
127344026 CDS
T08650
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lper04812
]
127344026
Cytoskeleton proteins [BR:
lper04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127344026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
Katanin_con80
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
127344026
NCBI-ProteinID:
XP_051226213
LinkDB
All DBs
Position
3:complement(267942332..267949458)
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AA seq
828 aa
AA seq
DB search
MDPEKRGYKFQEFVAHDAEVRSLAIGKKSSRVFITGGSDRKVNLWAIGNQTPLLSLSGHT
SSVEAVEFDTAEVLVLAGSSNGSIKLWDLEEAKAVRSLTGHRSSCTAVEFHPFGEFFASG
SSDTDLKIWDIKKKGCLHTYNGHRGAIKSIRFTPDGRWIVTGGEDNVVKVWDLTAGKLLH
DFKFHSGQIRCIDFHPQEFLLATGSADRTVKFWDLETFELIGSAGPEDTGVRSMVFHPDG
KTLFCGLDQSLKVFSWEPVRCHDAVDMGWNNLADLSIYEGKLLGCSYHERRVGVWVADIS
LIGPYALGVLPKANFFAELAHSMDDNPMKPNGSTTKSIRAVATPHPKNSYKVKESAESGI
RALHLTPASTDKTKKDKSSTIPRRSDSSVKSSTPVRRMKLADSPSTNPRTAERNFGQRDM
PLLSRAGVANKSSATKKFHPAELADVKDIYTTQSVSMPVAGPRDILEDKSIGSVNRGIGG
RAAVPDDFCSPVHLRKLLPSGGTVDSVSSVRSMLSEPDACSEGLSGLKFSFGLTPYDKKQ
EFDGTDKGAVTQIAEKMDKIVSLEHPVQSNSDTSAFESPCSTTETARVKYVRGVAVPLGK
TKSIVDRFEKRESSSIDCSPPTGSRGDRTVRVDSPPTSSTEPSQTYERDLSTVDEVINPI
DLVRNHDEFINVLKSRLTKLEMMRHVFNQNGIKGAIAAVAKLPDIAVQADVVGTLKGKIG
LFNLDVFSSFLPVLVGLLNSKTERHAFVSLEILLDLIKIFGPVIHSTLSASSTVGVDIQA
EQRLQRCTRCFNHLQKVLQALQPLMMRGGQSAQLAQELNMSLQNLVVF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgagaagcgcggctacaagttccaggagttcgtggcgcacgatgctgaagtt
aggtccttggcaattggcaagaagtcgagccgcgttttcattactggcggcagcgaccgc
aaggtcaacctatgggccattggcaaccagactccgctcctgagtttgtctggccacaca
agctcggttgaggctgtagagtttgatacagcagaggtgcttgtgcttgctggctcatca
aacggctccatcaagctctgggacttagaagaagctaaagctgtgcggtctcttactggg
catagatcgagttgcactgctgttgagttccatccattcggcgaattttttgcatctggt
tcttccgatacagatctcaagatctgggatataaagaagaaaggttgcctccatacatat
aatggtcacaggggtgcaattaaatcaatccggtttacacctgatgggcgatggattgtc
accggtggagaagataacgttgtgaaggtgtgggatctgacagctggaaagcttctacat
gatttcaagttccacagtggacaaatacgatgtatcgattttcatcctcaagaattttta
cttgcaacaggctcagctgatcgaactgtgaagttttgggatcttgaaactttcgaattg
ataggttctgctggacctgaggataccggtgtacgttctatggtctttcacccagatgga
aaaacccttttctgtgggttagaccaaagcttaaaggtattctcttgggaaccagtaagg
tgccatgatgctgttgacatggggtggaacaatttagctgatcttagtatttatgaagga
aaactgttgggatgctcgtaccatgaacgccgtgttggtgtttgggttgctgatatatca
ctcattggaccttatgctcttggtgttttgccgaaagcaaatttctttgctgagcttgca
cattccatggatgataatcctatgaaaccgaatggtagcactacaaagtctattcgtgct
gtagcaacgccacatccaaaaaactcatacaaagtcaaagaatctgctgaaagtggaatt
cgggccttgcatttaactccagcaagtacagataaaacaaagaaagataagagcagcacc
attcctcgaagatctgattcatctgtcaaatcatctactccagtgcgacgtatgaagctg
gctgatagtccttccaccaatccaagaacagcagaacgcaatttcggacagcgagacatg
ccattactatctcgtgcaggggtagctaataaatcttcagccactaagaaatttcaccct
gcagagttggcggatgtaaaagatatttacaccacacagtctgtttccatgcctgttgct
ggtcccagagacattttagaggacaagtcaattggcagcgttaatagaggaattggaggc
agagctgcagtcccagatgatttttgcagtccagttcacttaagaaaacttttacctagt
ggtggtactgttgatagtgtcagctcagtaagatccatgctcagtgagcccgatgcttgc
tcagaaggtttgtctggcttgaagttctcatttggactaactccatatgacaagaaacaa
gaatttgatggtacagataaaggagctgttacacaaatagcagaaaagatggacaaaatt
gtgtcattggagcatcccgtgcagtcaaatagtgatacgtcagcatttgaatcaccatgc
tcaacaacagaaacagccagggtcaaatatgttagaggagtcgctgtgccattaggaaaa
accaagtccattgttgatagatttgaaaagagagagagctctagcattgattgttcacca
ccaactggctctcgcggtgatcgtacagtgagagttgacagccctcccaccagttcaaca
gaaccaagtcagacatatgaaagagacttgtcaacagtggatgaggttatcaatccaatt
gatctggtgcggaaccatgacgaattcataaatgttctaaaatctcggttgacaaagcta
gagatgatgcggcatgtgtttaaccaaaatggtatcaaaggagcaattgctgcagtggcg
aagttgcctgatattgcggttcaagctgatgttgttggtaccctcaagggaaagattggt
cttttcaatctagatgtcttctcaagctttcttcctgttcttgttgggttactaaacagc
aagactgaaaggcatgcttttgtttccttggaaatattattggatcttataaagattttt
gggccagttatccattcaacactgtcagctagttcaactgttggagtagatattcaagcc
gaacagaggttgcagcgttgcaccaggtgttttaaccatttgcaaaaagttctgcaagcg
ctacaaccgttgatgatgcggggtggtcaatcggcgcaacttgctcaggagctaaacatg
tccttgcaaaacctggtggtcttctga
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