Lolium perenne (perennial ryegrass): 127344026
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Entry
127344026 CDS
T08650
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lper04812
]
127344026
Cytoskeleton proteins [BR:
lper04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127344026
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
127344026
NCBI-ProteinID:
XP_051226213
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Position
3:199390289..199397416
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AA seq
828 aa
AA seq
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MDPEKRGYKFQEFVAHDAEVRSLAIGKKSSRVFITGGSDRKVNLWAIGNQTPLLSLSGHT
SSVEAVEFDTAEVLVLAGSSNGSIKLWDLEEAKAVRSLTGHRSSCTAVEFHPFGEFFASG
SSDTDLKIWDIKKKGCLHTYNGHRGAIKSIRFTPDGRWIVTGGEDNVVKVWDLTAGKLLH
DFKFHSGQIRCIDFHPQEFLLATGSADRTVKFWDLETFELIGSAGPEDTGVRSMVFHPDG
KTLFCGLDQSLKVFSWEPVRCHDAVDMGWNNLADLSIYEGKLLGCSYHERRVGVWVADIS
LIGPYALGVLPKANFFAELAHSMDDNPMKPNGSTTKSIRAVATPHPKNSYKVKESAESGI
RALHLTPASTDKTKKDKSSTIPRRSDSSVKSSTPVRRMKLADSPSTNPRTAERNFGQRDM
PLLSRAGVANKSSATKKFHPAELADVKDIYTTQSVSMPVAGPRDILEDKSIGSVNRGIGG
RAAVPDDFCSPVHLRKLLPSGGTVDSVSSVRSMLSEPDACSEGLSGLKFSFGLTPYDKKQ
EFDGTDKGAVTQIAEKMDKIVSLEHPVQSNSDTSAFESPCSTTETARVKYVRGVAVPLGK
TKSIVDRFEKRESSSIDCSPPTGSRGDRTVRVDSPPTSSTEPSQTYERDLSTVDEVINPI
DLVRNHDEFINVLKSRLTKLEMMRHVFNQNGIKGAIAAVAKLPDIAVQADVVGTLKGKIG
LFNLDVFSSFLPVLVGLLNSKTERHAFVSLEILLDLIKIFGPVIHSTLSASSTVGVDIQA
EQRLQRCTRCFNHLQKVLQALQPLMMRGGQSAQLAQELNMSLQNLVVF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgagaagcgcggctacaagttccaggagttcgtggcgcacgatgctgaagtt
aggtccttggcaattggcaagaagtcgagccgcgttttcattactggcggcagcgaccgc
aaggtcaacctatgggccattggcaaccagactccgctcctgagtttgtctggccacaca
agctcggttgaggctgtagagtttgatacagcagaggtgcttgtgcttgctggctcatca
aacggctccatcaagctctgggacttagaagaagctaaagctgtgcggtctcttactggg
catagatcgagttgcactgctgttgagttccatccattcggcgaattttttgcatctggt
tcttccgatacagatctcaagatctgggatataaagaagaaaggttgcctccatacatat
aatggtcacaggggtgcaattaaatcaatccggtttacacctgatgggcgatggattgtc
accggtggagaagataacgttgtgaaggtgtgggatctgacagctggaaagcttctacat
gatttcaagttccacagtggacaaatacgatgtatcgattttcatcctcaagaattttta
cttgcaacaggctcagctgatcgaactgtgaagttttgggatcttgaaactttcgaattg
ataggttctgctggacctgaggataccggtgtacgttctatggtctttcacccagatgga
aaaacccttttctgtgggttagaccaaagcttaaaggtattctcttgggaaccagtaagg
tgccatgatgctgttgacatggggtggaacaatttagctgatcttagtatttatgaagga
aaactgttgggatgctcgtaccatgaacgccgtgttggtgtttgggttgctgatatatca
ctcattggaccttatgctcttggtgttttgccgaaagcaaatttctttgctgagcttgca
cattccatggatgataatcctatgaaaccgaatggtagcactacaaagtctattcgtgct
gtagcaacgccacatccaaaaaactcatacaaagtcaaagaatctgctgaaagtggaatt
cgggccttgcatttaactccagcaagtacagataaaacaaagaaagataagagcagcacc
attcctcgaagatctgattcatctgtcaaatcatctactccagtgcgacgtatgaagctg
gctgatagtccttccaccaatccaagaacagcagaacgcaatttcggacagcgagacatg
ccattactatctcgtgcaggggtagctaataaatcttcagccactaagaaatttcaccct
gcagagttggcggatgtaaaagatatttacaccacacagtctgtttccatgcctgttgct
ggtcccagagacattttagaggacaagtcaattggcagcgttaatagaggaattggaggc
agagctgcagtcccagatgatttttgcagtccagttcacttaagaaaacttttacctagt
ggtggtactgttgatagtgtcagctcagtaagatccatgctcagtgagcccgatgcttgc
tcagaaggtttgtctggcttgaagttctcatttggactaactccatatgacaagaaacaa
gaatttgatggtacagataaaggagctgttacacaaatagcagaaaagatggacaaaatt
gtgtcattggagcatcccgtgcagtcaaatagtgatacgtcagcatttgaatcaccatgc
tcaacaacagaaacagccagggtcaaatatgttagaggagtcgctgtgccattaggaaaa
accaagtccattgttgatagatttgaaaagagagagagctctagcattgattgttcacca
ccaactggctctcgcggtgatcgtacagtgagagttgacagccctcccaccagttcaaca
gaaccaagtcagacatatgaaagagacttgtcaacagtggatgaggttatcaatccaatt
gatctggtgcggaaccatgacgaattcataaatgttctaaaatctcggttgacaaagcta
gagatgatgcggcatgtgtttaaccaaaatggtatcaaaggagcaattgctgcagtggcg
aagttgcctgatattgcggttcaagctgatgttgttggtaccctcaagggaaagattggt
cttttcaatctagatgtcttctcaagctttcttcctgttcttgttgggttactaaacagc
aagactgaaaggcatgcttttgtttccttggaaatattattggatcttataaagattttt
gggccagttatccattcaacactgtcagctagttcaactgttggagtagatattcaagcc
gaacagaggttgcagcgttgcaccaggtgttttaaccatttgcaaaaagttctgcaagcg
ctacaaccgttgatgatgcggggtggtcaatcggcgcaacttgctcaggagctaaacatg
tccttgcaaaacctggtggtcttctga
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