Lolium perenne (perennial ryegrass): 127344393
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Entry
127344393 CDS
T08650
Name
(RefSeq) uncharacterized protein
KO
K14306
nuclear pore complex protein Nup62
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127344393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127344393
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127344393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
SGT1
COG3_N
Motif
Other DBs
NCBI-GeneID:
127344393
NCBI-ProteinID:
XP_051226618
LinkDB
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Position
3:278625388..278634788
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AA seq
728 aa
AA seq
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MATSFAFGNSGAAGSTSPSPFSFSTAPSAFSSSPAPAFGSSPAPAFGSSAFPSAAASTPA
FGSSLFGASPASASAPAAASSPSPFGFGATGFGAAQPPSSSASPLFGVAATSAAATTPTM
FGTTTTTPSIFGAPATSSAATTPSIFGASATSSAATTPGLFGAPATSSAASTPSLFGAAS
TPATTPGIFGATTAAATTPSLFGAVSSAASTPGFGFGSSASGATTAPTPSFGFNSAPAAS
STAATSASTPALGFGAATGSTLFGSTSPAPLFGTTAASSPATTAPSLGFSLSPATTASAP
SFGFAPSSGSTTSSLFSSAPSASAFSFSNSAPAASSTPASGFSLATSQAASAPSMFSSTG
AAASSSASSLFGASFAAPTPTFASVSATTASTVPSATATPATAGSLFSAPPSSSLGFSFT
VPPSASSSAAVTATITSSSTSAAVTTTTPSTTTSAFPSFSLQPTTQASASTSVAPSTLFG
STTPTSTSAITTTTQATSSAVQASTTGSTTNAITPAASQAPKLPSEIVGKCVEEIIRDWN
NGLQDRTAKFRKHATAISEWDRRILQNRNVLIRLEADVAKVVETQTSLERQLELIETHQK
EVDKALQSMEEEAERIFQDERVLLREDEAASARDTMYEQGEVVENELQHMTEQVKSIIQT
MNATQGGELEAADSMAPFDVAVRILDNQLRSLMWIDEKANEFSNRIQRLPNNSTVAERDS
GIPRFWLS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccttcgcgttcggcaattccggcgcggcgggatccacctcgccctcgccc
ttctccttctccaccgccccatccgccttctcctcctccccggcacccgcgttcggttcc
tccccggcacccgccttcggctcctccgccttcccttccgccgccgcctctactcccgct
ttcggttcgtccctcttcggagcctcccccgcctccgcatccgctcccgccgccgcttcc
tccccgtccccttttggcttcggggccactggttttggggccgctcagccgccttcctcg
tccgcctcgcccctcttcggagtagccgccacctccgccgcggcaaccacacccaccatg
ttcggcaccaccaccaccacccccagcatcttcggcgcaccagccacctcatctgcggcc
actaccccgagcatcttcggcgcatcggccacctcatctgcggccactaccccgggcctc
ttcggcgcaccagccacctcatctgcggccagcaccccgagcctcttcggcgccgcatcc
acccccgcgaccactccaggtatcttcggcgcgaccaccgccgccgccaccacccccagc
ctgttcggcgccgtctcttccgccgcgtccacgccgggcttcggctttggctcatccgcg
tcaggcgccaccactgccccaacaccgtcattcggcttcaacagcgcgcccgccgcatct
agtaccgccgctacctcagcttccacaccggctctagggtttggggccgccactggctcg
accttgtttggatccacctcgcctgcgcctctattcggcaccaccgccgcctcgtctcca
gctacgaccgcgccatcccttggtttttcattatccccagcaactactgcctcagccccc
tcgttcggcttcgcaccatcgtcaggaagcaccacatcttccctgttctcgtctgctccc
tcagcctccgccttctcgttctctaacagtgctcccgccgcttcatccacgccggccagt
ggtttctccttggccacttcgcaggctgcgtctgctccctcgatgttctcaagcacaggt
gcagcagcaagctcgtcagcgagctccctttttggtgcatcttttgctgctcctacaccg
acatttgcctctgtttctgcaacgactgcatccactgtgccatcagctactgctactcct
gcaacagcggggtcattgttctcggcaccaccttcttcctctcttggcttcagctttaca
gtaccgccatcagcttcatcatcagcagcagttacagccaccattacaagttcctcaaca
tctgcagccgtgacaaccaccaccccttcaactacgacgagcgcgtttcctagttttagc
ctgcaaccaactactcaagcttctgcctcaacgtcggtggctccgtcaacactgtttggt
tctactacacccacaagcacgtcagccatcacgaccacaactcaggcgacttcatcagct
gttcaagctagcaccactggatctactactaatgctattactccagcagcatcccaagca
ccaaagctcccatcagaaattgttggtaaatgtgttgaggagattattagggactggaac
aatgggcttcaagaccgtactgctaagttccggaagcatgccactgccatatctgagtgg
gacaggagaattctgcaaaataggaatgttcttataaggcttgaggctgatgttgctaaa
gttgttgaaacacaaacaagcttggagaggcaacttgagttgatagaaactcatcagaaa
gaggtggacaaggctctacagagcatggaggaggaagctgaacggatattccaggatgag
cgtgtcttacttcgtgaagatgaggctgcctctgcaagagatacaatgtatgagcaaggt
gaagtcgtagagaatgaattgcaacatatgacagaacaagtaaaatccatcattcagacc
atgaatgctactcagggtggtgagctagaggcagcggatagcatggcgccattcgatgtt
gctgttcggatactggataatcaactgcgctctctaatgtggattgatgagaaggcgaat
gagttctcaaacaggatacagagactgcccaacaatagtactgtggctgagcgcgactca
ggaattccaaggttttggttaagctga
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