Lolium perenne (perennial ryegrass): 127344465
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Entry
127344465 CDS
T08650
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127344465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127344465
03036 Chromosome and associated proteins [BR:
lper03036
]
127344465
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127344465
Coactivators
SAGA/TFTC/STAGA complex
127344465
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127344465
STAGA complex
127344465
TFTC complex
127344465
SAGA complex
127344465
SLIK complex
127344465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
127344465
NCBI-ProteinID:
XP_051226712
LinkDB
All DBs
Position
3:complement(275548739..275555184)
Genome browser
AA seq
545 aa
AA seq
DB search
MADPPSVAAIASPQPDQLGASAAAPQSSNPNPLLSPQIPPSPTVSDLSAISSPQLDPAAA
AAGGGPADFPPRPQQLQAPSPTQAVAGAGAGGYGQIHRSGSASRLAAASQLPQYSAAAAR
MYGGQMSFSGGGGQLGQQQQLAARAAMLGQGQLGMMQGQGNAVSAAHYGLQSQMMSQPRQ
KGIVQGAQFNTANTAQALQGMQSMGVMGTLGMNQMRPNGTIPYSAQQRFAHAQMKPQQVS
QQGALSPQKVAGQGLSRTASIAALNSQLPGASQNGQMMQMSPQQQQQWLKQIQSSMASPV
SSHQLQQQQRMILMQQLQKSGLSPHQIAQAQQQHPHLNAQQLMHQQQILQQLQQQQQQQS
PRMPASGSQKSANLTGSQPGTPLSGGTMAGGSGSQGAEGTSQLLGKRKIQDLVAQVDPLG
KLDPEVEDLVLEIADDFIESVTAFACSLAKHRKSSVLEAKDVLLHLQKNWHLTVPGFSKE
DKNPQRNYVKAVVDAQQLESEAAAVRSASNKQVTNNSIANNQTRGPLAEPSPTPTVGSLS
KIPRF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgccgtccgttgccgccatcgcctcgccgcagcccgaccagcttggcgcc
tccgccgccgccccacagagctccaaccctaaccccctcctatccccccaaatccccccc
tcccccaccgtctccgacctctccgccatttcctccccgcagctcgacccagccgcggca
gctgcaggcggaggaccagcggacttcccgcctcgtccgcagcagctgcaggcgccttcg
cccacgcaggcagtggccggcgctggcgccggaggctatggccagatccaccgctcgggt
tcggcctcccgcctcgccgctgcgagccagcttccgcaatactccgctgcagcggccagg
atgtacggcgggcagatgagcttctctggcggcggagggcagctcgggcaacagcagcag
ctggccgcgcgcgcggcaatgctcggtcaggggcagctggggatgatgcaagggcagggc
aacgcggtctctgctgcacactacgggctccagtcacagatgatgtcacagccaaggcaa
aaaggaatagtacaaggtgcacaatttaatactgcaaatacagctcaagcgttgcaaggg
atgcaatccatgggagtcatgggtactttggggatgaaccagatgagaccaaatggaacc
attccatatagtgcccaacaacgttttgcccacgcacaaatgaagccacaacaagtgtcg
caacaaggtgcactatctccacagaaggtagctggtcaaggcttgtcgagaacagcatca
attgcagcattaaattcacaactacctggagcatcgcaaaatggacagatgatgcagatg
tcacctcagcaacagcagcaatggttaaagcaaatacaatcgtcgatggcctcacctgtt
tcttcacatcaacttcagcagcaacaaaggatgattttgatgcaacaacttcagaaatct
ggactgagtccacaccagattgcacaagcccagcaacagcacccacatctcaatgctcaa
cagttgatgcatcagcagcagattttgcagcaacttcaacagcagcaacagcaacaatct
cctaggatgccagcatctggttcccagaagtctgcaaacttgacgggatcacagccaggc
acgcctttgtcaggtgggactatggctggtggaagtggaagtcaaggagcagaaggaact
agtcaacttctggggaagagaaaaatacaagatttggttgcgcaggtggatcccctgggc
aaacttgatccagaagtggaggatttggttttagagatagcggacgacttcattgagtcg
gtgactgcatttgcgtgcagcctggcaaagcaccggaagtcatcagttctggaagccaaa
gatgtcttgctacacctacagaaaaattggcatctgactgttcctggtttctcaaaggag
gacaaaaatccacagagaaattatgtaaaggcagtggtggatgcccaacagctggaatct
gaagctgctgcagttagaagcgcaagtaataagcaggtcactaataattctattgccaac
aatcagacaagaggtcctttggcggagccttcaccaacacctacagtgggctctctgtca
aaaattcctcgtttctga
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