Lolium perenne (perennial ryegrass): 127344661
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Entry
127344661 CDS
T08650
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127344661
Enzymes [BR:
lper01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127344661
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
127344661
NCBI-ProteinID:
XP_071683593
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Position
3:complement(248989213..248990370)
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AA seq
315 aa
AA seq
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MADVTPIQAYEQLGNDPSMGDTAPPQLPNDQVWKEPAPVQETVLMPYAAVDSSLRAMAGQ
AEGFGRHAIGGLHGDVYHVTNLHDDGPGSLRDGCRRREPLWIVFDVSGTIRLASGLRVSS
YKTVDGRGQRIVLSGKGLLLRECEHVILCNLEVEGGRGHDADAVQIKPGSRHVWVDRCGL
RDFADGLLDVTCGSTDVTVSRCRFWAHDKAVLIGASSGHVGDRRIRVTIHHCFFDGTRQR
QPRVRFGRVHLYNNYTRNWGIYAVCASVESQIISQCNIYEAGDKKKVFMYMPEQVIGYTG
FYKSISLSMRFVIEK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcacgcctattcaagcatacgagcagctcggcaatgacccgagcatgggc
gacacagcccctcctcagttacctaacgaccaagtctggaaggagccggctcccgtgcag
gagactgtgcttatgccgtacgcagctgtcgattcctcgttgcgcgccatggctggtcag
gccgagggcttcggccggcacgccatcggcggcctccacggcgacgtctaccacgtcaca
aacctccatgatgacgggcccggctcgctccgggatggttgccgccgccgcgagccgctg
tggatcgtcttcgacgtatccggcaccatccgcctcgcttcaggcctccgcgtgtcctcc
tacaagaccgtcgacggccgcgggcagcgcatcgtcctctccggcaagggcctgctgctg
cgggagtgtgagcacgtgatcctctgcaacctggaggtggagggcgggcgcgggcacgac
gccgacgccgtccagatcaagcccgggtcgaggcacgtgtgggtggaccggtgcggcctg
cgcgacttcgccgacggcctcctggacgtgacctgcggcagcacggacgtgacggtgtcg
cggtgccgcttctgggcgcacgacaaggccgtgctcatcggcgccagcagcggccacgtc
ggagaccggcgcatccgggtgaccatccaccactgcttcttcgacggcacccggcagcgg
cagccgcgcgtcaggttcggcagggtgcacctctacaacaactacaccaggaactggggc
atctacgccgtctgcgccagcgtagaatcacagatcatctcccagtgcaacatctacgaa
gcaggggacaagaaaaaagtgttcatgtacatgccagagcaggtcattggttacacagga
ttctacaaatccatttctctgtcaatgcgatttgttattgaaaaatag
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