Lolium perenne (perennial ryegrass): 127344928
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Entry
127344928 CDS
T08650
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-1
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127344928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127344928
Spliceosome [BR:
lper03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
127344928
Complex B
127344928
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Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
127344928
NCBI-ProteinID:
XP_051227266
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Position
6:93583684..93590296
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AA seq
218 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQVGAPFNQHMMQFPGNMPRPRLPILPTPMMPQGYMQQPGVPFAGVRPPILPAPPGP
PGPQGYPGGPPMQQMPQQGGPPGSMPMQMAPLPRPPTLPPPTSGAPGAPMSNSAAPPGPP
PMYQPNQPPSAGPASGPPAPAAPPQATFSYAQPSEGNH
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgcgattactgcgacacatacctcacccatgactcgccgtctgtc
cgtaagcaacacaacgctggatacaaacataaggcaaatgttcgaagctactatcagcaa
tttgaggagcagcaaactcaaagtttgattgatcaaaggattaaagagcatcttggacaa
gcggcagcattccaagtcggtgctccattcaaccaacatatgatgcaatttcctggaaat
atgccccgtccccgccttccgattctgcccacacctatgatgccacaaggttatatgcaa
caacctggtgtaccatttgcaggagttaggcctcctattttaccagctcctcctggtcct
cctggtcctcaaggttaccctggtggcccacccatgcagcagatgccgcaacaagggggc
cctcctggttccatgcctatgcagatggcacctctcccaaggcctccgacgctaccgcct
ccaacgtctggagccccaggtgcccccatgtccaacagcgcagcacctccaggtcctcca
ccaatgtatcagccaaatcaaccaccaagtgcaggcccagcctctggccctccagccccg
gcagctcctccacaggctacattctcctatgcacaaccctctgagggcaaccactga
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