KEGG   Lolium perenne (perennial ryegrass): 127345290
Entry
127345290         CDS       T08650                                 
Name
(RefSeq) endoribonuclease Dicer homolog 3a isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
lper  Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:lper00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lper03036]
    127345290
Chromosome and associated proteins [BR:lper03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    127345290
   microRNA pathway
    RISC loading complex
     127345290
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer Helicase_C DEAD ResIII PAZ dsrm SWI2_SNF2 Dicer_dsRBD DND1_DSRM PCDO_beta_N
Other DBs
NCBI-GeneID: 127345290
NCBI-ProteinID: XP_051227699
LinkDB
Position
3:complement(303725672..303737145)
AA seq 1659 aa
MADLGAAAGRGGDDAMDAAAGPPTAAEVEAAPVPDVNMNPLKRSSESSAQEDDADRQKRQ
KTECQEFIPRRYQLDVYEVAKARNTIAMLDTGAGKTMIAVMLMKDFRSKVDKSRNDRKVI
VFLAPTVQLVTQQCEVIRAHTDFEVELYYGAKGVDEWTAPRWKEEVSKYQVMVMTPMVLL
DALCKAFLTLDLVSLMIFDECHRATGNHPYSRIMKEFYHQSEHKPKVFGMTASPVIKKAV
SSVLDCEVQFSELEKLLNAKIYTVADREEIELCAPTAEYVNRYYAPKTVCFNYLNEELAL
LRSEYDALIRKLQNKPNYQKKEADEIAKQSRKHLSDSIEKILYCLDSVGLLCASEATKIC
IERSQRKGWLKKVSDATNIQSDTNSSFLCAEISALHLKFFDAVSRILDKHLQKGSNVLLN
SESGCVEATKMGYVSPKLYELIQIFYSFSNLDHFRCLIFVDRKITARVIERAMKKFSQLS
HFTVSFLTGGSSSVDALTPKVQKDTLDSFRSGKVNLLFSTDVAEEGIDIPDCSCVIKFDL
PTTTRSYIQSSGRARQKDSQYILMIERENAKQNNLVSAILRSKNSMVETALNRDSEDLLP
GFFAVQETNEYIVGTTGAKVTAESSIGVIVHCCNKLSKDKYNTTNPSFESMDHGDGFVCK
LTLPFSDVLPPLVGPKARSKQKAKQLVCLDACKQLHRRGILDDSLCPSFEKPPPGSDGVG
TTKRKELHGTTGVHALSGTWASERTAVKLQSYKLKFSCDQVGQRYSDFVLLIDTTIENEA
ANLDIDLYLHDKMVKASVSPYGLLELDVEQMEKAKLFQALMFNGLFGKLFTGSKLSDDPR
EFILNKSDAFIWKNANMYLILPMNLTLESHGISCINWRVINEAATAVKLLKKIYAEATMN
IPGILDCDQNDTDLIHLANTSCEAHVLRNVAVLAVHTGKIYTALHVADLSANSTFDGVSD
KKEAKFNTFTEYFENKYNIVLRHPSQPLLVLKPTHKPHNLLSSKFRDEGNREKKNDVINK
ANNRVHMPPELLIPLNLSEDILRSFYLFPSLMHRIETLMLASQLKSEISYEDSNISSFLI
LEAITSLRCSEDFSMERLELLGDSVLKYAASCHLFLKFPDKDEGELTSSRTDIISNAALY
GLGIEHKIQGYIRDAAFDPRRWLAPGQLSIHPVPCNCSLDEVVTHDIDAVDDKPIVKIGQ
MCDKGHRWMCSKTISDCVEAIIGAYYVGGGLRAALSVLKWLGVDADIEEELIIQTILNAS
MRTYLPKVDVIKMLEAKLGYAFSVKGLLLEALTHPSHQESAESYSYQRLEFLGDAVLDIL
LTRHLFNSHKDTDEGELTDLRCASVNNENFAQVAVKHKFHQFLQHSSGILPDQITEYAHS
LENSSLDKDKLLSDAALRGPKVLGDIVESIAGAVLIDTKLDLDVVWGVFKPLLSPIVTPE
NLELPPFRELLEWCSKNGYFVEIKCTVGEKIEATLGVQLKEKLLVRHGCGTNKKDSKAHA
ASMLLMDLQKEGLLIPKNASRTQHANGSNNLFDALDIRLPTPTSGKKSTGSKLAAILGKP
VHVLVKTSKGGPRAALYEVCKKLQWPVPSFDSVKVKPSCAKSMPHGFSFATTIALQIPSD
DKISLTGDGFADKKSAMDSAALLMLHELQRRGRLQVQEV
NT seq 4980 nt   +upstreamnt  +downstreamnt
atggcggacctgggagcggcggccggaaggggaggcgacgacgcgatggacgccgccgcc
gggcctccgacggcggcggaggtggaggccgcccccgtccccgacgttaacatgaaccct
ctgaagaggtcgtcggagtcgtctgctcaggaagacgatgcagacaggcagaagcggcag
aagacagagtgtcaagaattcattccgaggagataccagctcgatgtctacgaggtcgcc
aaggcgcggaacacgatcgcgatgctcgacacgggagctgggaagacgatgatcgctgtg
atgctcatgaaggattttcggagcaaggtcgacaaatcgaggaacgacaggaaggtcatc
gttttcctcgcaccgacggttcagctcgtcacgcagcaatgcgaggtgattagagcccac
acggattttgaggtggagctctactatggcgccaagggggtcgacgaatggacggctcct
agatggaaagaagaagtgtcgaaatatcaggtcatggtgatgacaccaatggtgttgcta
gacgctttatgtaaagcgttcttgaccttggacttggttagtcttatgatatttgatgaa
tgccatcgtgcaactggcaatcatccgtattctagaataatgaaggagttttatcaccaa
tctgaacacaagccaaaggtgttcggtatgacagcatcacctgttataaaaaaagctgtc
tcttctgttttggattgtgaagttcagttctctgaactggaaaagcttctaaatgctaag
atctacacagttgctgatagagaagagatagagctttgtgcccctactgcagaatatgtg
aacagatactatgcccccaaaacagtttgtttcaactatttgaatgaagagttggcactt
ttacgttccgagtatgatgcattaattagaaaattgcagaataagccaaactaccagaaa
aaagaagccgatgaaatagcaaaacaatcacggaagcatctatcggattctatagaaaag
atcttgtattgccttgattctgttggtcttctttgtgctagtgaggccaccaaaatctgc
attgaaaggagtcagagaaaaggttggctgaagaaagtttctgatgccacaaatattcaa
agtgataccaatagctcgttcctgtgtgcggaaatttcagcactacatttgaagttcttt
gatgccgtgtcacgtatacttgacaaacacctccagaaaggtagcaatgtgcttctaaat
tctgagagtggatgtgtggaagcaacaaaaatgggctatgtatcaccaaagctttatgaa
ctcatccaaatcttctactctttcagtaacttagaccatttccgatgcctcatttttgtg
gaccgaaaaatcactgctagagtcattgaacgggcaatgaagaaattttcacagctctca
cattttacagtttcttttcttactggagggagttcttcagtggatgctctgacccctaaa
gtgcaaaaggacacactggattcatttcgttctggaaaggtgaacttactatttagtaca
gatgttgcagaagagggtattgatatcccagactgttcatgtgtaataaaatttgattta
ccgacgacaacccgtagctatattcagtcaagtgggcgagcacgccagaaggactctcag
tacatactaatgattgaacgggaaaatgcgaaacaaaataatttggtatcggccattttg
agaagcaagaactcgatggttgagactgctttgaacagagattccgaggatctactccct
ggtttcttcgccgttcaagaaacaaatgaatacattgtaggcacaacaggcgcaaaagta
actgccgagtctagtattggtgttatcgtccactgttgtaacaagctttcaaaggacaag
tacaacaccacaaacccttcatttgagtccatggatcacggtgatggttttgtgtgtaaa
ttaacactaccatttagcgatgtgttgccacctttggtgggtccaaaagcaagaagcaag
cagaaggcaaaacaactagtttgtcttgatgcatgtaagcagctgcatcgacggggaata
cttgatgactccctttgtccatcttttgaaaagccacctccaggaagtgatggtgtaggt
acaacaaaacgaaaggagctacatggcacaactggagtccatgccttgtctggtacctgg
gcatctgagagaactgctgttaagcttcaaagctataagttgaaattttcttgtgatcaa
gttggtcagagatactctgattttgttttgttaatcgacacaactatagaaaatgaagct
gcaaatttggatattgatctgtatctacatgacaagatggtaaaagcttcagtctctcct
tacggccttcttgagttggatgttgaacagatggagaaagcaaagctatttcaagcactt
atgttcaatggtttattcggaaagttgtttactggatcaaaattgtccgacgatccgagg
gagtttattctcaataaaagtgatgcatttatttggaaaaatgcaaatatgtatctgatt
ttacctatgaatcttactctggagtctcatggcatttcttgcattaactggagagtgatc
aatgaagctgctacagctgtcaaacttttgaaaaagatttatgctgaagccaccatgaac
ataccaggaattctcgattgcgaccaaaatgatacagatctaattcatttagctaacacg
tcatgtgaggctcatgtccttagaaatgtggcagtgctggcagttcacacagggaagatc
tatactgctcttcatgttgctgatttatctgccaatagcacatttgatggtgtatcagat
aagaaagaagcaaagttcaatacctttacagaatacttcgaaaataagtacaacatagtt
ctccgtcatccctcacagccattactagtgctaaaacccacccataaacctcacaacctt
ctttcctcaaagttcagagatgaaggtaaccgtgagaagaaaaatgatgtcattaataag
gcgaacaaccgtgttcacatgcccccagagttgctgattccccttaatttatctgaggac
attttaagatcattttatttgttcccctctttgatgcatcgtatagagacattaatgcta
gccagtcaactaaaaagtgaaatttcatatgaggattcaaatatatcaagctttctgatt
ctagaagctattacatcacttcgatgctctgaagacttctccatggagcgtctagaatta
ttgggagattctgtgctgaagtatgccgcgagttgtcaccttttcctgaaatttcctgat
aaggatgagggggaattaacatccagtaggactgatatcatatctaatgccgcactttat
gggcttggaattgaacacaaaattcagggttacatacgtgatgctgcatttgatcctcgc
cgatggcttgcaccaggacagctctcgattcaccctgttccttgtaattgctcgctagat
gaggttgtaactcatgatatcgatgccgttgatgacaaacctattgtgaaaataggccag
atgtgtgataagggacacagatggatgtgttccaaaacaatttcggactgtgttgaagcc
ataattggcgcatattatgtaggaggtggattaagggcagctctgtctgttctcaaatgg
ttgggtgttgatgctgacattgaagaagaattgattattcagaccatcttgaatgcatct
atgaggacttatcttccgaaagttgatgtaattaaaatgcttgaagcaaaactaggctat
gcattttcggtgaaaggtcttctgctagaagctcttacccacccatcacatcaggaatca
gcagaaagttactcctaccagcgtctggaattccttggcgatgctgtcttggatattcta
ttaacacgacatcttttcaatagtcataaagacaccgatgagggggagttgacagattta
cgctgtgcttcagtaaacaatgaaaattttgcacaagtcgcggtcaagcataagttccat
caatttctccagcattcttctgggattttaccagaccagattactgaatatgcacatagt
ttggaaaattcttccttggacaaagacaaactattatcagatgctgcattaagagggcct
aaagttctaggtgatattgtagaaagtattgcgggtgcagttcttatagatacgaaactt
gatttggatgtagtttggggtgtattcaagcctcttctttcacctattgtcacacctgag
aacctggagttgcctcctttcagagagcttctcgagtggtgcagcaaaaatgggtatttt
gtagaaattaagtgtacagttggagagaaaatagaggctactctgggtgtgcaactcaag
gagaagctccttgtcaggcatggttgcggcacgaacaaaaaggattctaaagcacatgca
gcttccatgttactcatggaccttcagaaagaaggacttctaatccccaagaatgcaagc
aggactcaacacgcaaatggcagtaacaacttgtttgatgcactggatatccggcttcca
acaccaaccagcggaaagaaatcaactggttcaaagttagctgctatccttggtaaacca
gtgcacgtgctggtgaaaacgagtaaaggaggacctcgtgcagcactgtatgaggtatgc
aaaaaattgcaatggccagtgccttcttttgattcggtgaaagtaaaaccaagctgtgca
aaatctatgcctcacgggttctcattcgctacaaccatagcattgcaaattcctagtgat
gataagatcagcctcacaggagacggtttcgcggacaagaaaagcgcaatggattctgct
gcactgctcatgctccacgagcttcagcggcgaggtagattgcaagtccaggaggtatga

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