Lolium perenne (perennial ryegrass): 127345391
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Entry
127345391 CDS
T08650
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03030
DNA replication
lper03420
Nucleotide excision repair
lper03430
Mismatch repair
lper03440
Homologous recombination
lper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127345391
03420 Nucleotide excision repair
127345391
03430 Mismatch repair
127345391
03440 Homologous recombination
127345391
03460 Fanconi anemia pathway
127345391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127345391
03032 DNA replication proteins [BR:
lper03032
]
127345391
03400 DNA repair and recombination proteins [BR:
lper03400
]
127345391
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127345391
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127345391
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127345391
MMR (mismatch excision repair)
127345391
DSBR (double strand breaks repair)
HR (homologous recombination)
127345391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF936
zf-CCHC_2
Death
DUF223
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
127345391
NCBI-ProteinID:
XP_051227832
LinkDB
All DBs
Position
1:31227697..31239251
Genome browser
AA seq
834 aa
AA seq
DB search
MQAPRLTSGAVKEIAELPKGLGTIQPVLQVADVRPITAKSAAGSDRFRMLVSDGVHSLQS
MLSTDLNRFVTDGTLRLGSIVHLLEVMCSDIQGRRIIIVCKLDILQSECDMIGKPKIYET
KSSREGQEPNLRATAVAPRVEQVANNLSYGGPYNGVHGTLDSSIGRTVRSGPNNVFSRSS
HDTMSTQNTMHTNVVQPNPQQPLLNSHQSQRFAVPSTAGGLGPPDNTYYRPAQTSYQQPP
PAYRNSGPVTKKEAGPRVTPISALNPYQGTWKIKARVTAKTHVNHYKNAQGPGKLFTFDL
LDAHGGEIRAKCFKDVVDQFYDLIEVGKVYFISGGGPGALKPAQKQYNHLNSEFEISMDA
RTSVEVCSSDDNSIRSQRFNFRQISEIANMDIGAMLDLLGVVTSVSTSSTVTRKNGVKTS
KRVLQLKDMSGCSVETTLWGNFCDAEGQQLQLLCDSGSSPILALKSGRICDFNGRSVGTI
SSSCLKINPDGPEAERLRQWYITEGKNAAVTSLSVGMSSMGRTDVRTTIAQIKEEGMGKS
EKPDWITVMGTVWNIKTDNFCYPACTGVVNGTRCTKKVTKDVDEMWQCESCEQSSQNCEY
RYMLPCKIQDHTGSTMYATAFQDAGEEIIGLPAQDLFTIKNEDQDDEKFAEIIQRARYQH
YLFKLKVKEETYNDEARVKCTIVKVQKLDDTAKESRFLLGVIDSLLAEDGSGSTPAVNGG
AASNAGFTSNNTYTMNMGFPNQFGQQASLYGGMPSTPSATRYAQTGHVSRDSPVQANSYG
PSAGNTSTSLCYMCSQPGHFARDCPVQAAAPRRQTYGNGAATSGYNRQSNAGNF
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgccgcggctgacctcgggcgcggtgaaggagatcgcggagctccccaaaggg
ctgggcacgatccagccggtgctgcaggtggcggacgtgcggcccatcaccgccaagagc
gcggcggggtccgaccggttccggatgcttgtctccgacggcgtgcactcgctgcagtcc
atgctctccaccgacctcaaccgcttcgtcaccgacggcaccctccgcctcggctccatc
gtccacctcctcgaagtcatgtgcagcgacatccagggccgcaggatcattattgtttgc
aaacttgatattctgcaaagtgagtgtgacatgatcgggaaaccaaagatttatgagact
aaaagttcacgtgaaggccaggagcctaacttacgggccactgctgttgccccaagggtg
gaacaggttgctaacaatctgtcatatggtggaccctacaatggtgtccacggcacattg
gactcttcgattggtcggacagtcagatctggacctaacaatgtgttttctcgtagttct
catgatacaatgtcaacacaaaacacaatgcataccaatgttgtgcagcccaaccctcag
cagcctttactgaactctcatcaaagccaaaggtttgcagttcctagcacagctgggggc
ctcggccctcctgacaatacttattatcgtcctgcacagacttcatatcagcagccacct
ccagcatatagaaatagtggcccagttactaagaaggaagctggccctcgtgttaccccg
atttctgcattgaacccataccaaggcacatggaagataaaggctagggtgactgcaaag
actcatgtcaatcactacaaaaatgcacaaggtccaggaaaactcttcacttttgatctc
cttgatgcacatggcggagaaattcgtgcaaaatgttttaaagatgtcgttgatcagttc
tatgacctaattgaggttggtaaggtgtactttatatctggagggggcccaggggcgctg
aaacctgcacagaagcagtataaccatttgaacagtgagttcgaaatcagtatggatgct
agaacatctgtagaagtttgttctagtgatgacaacagcatccgcagtcagcgtttcaat
ttccgacaaatcagcgaaatagcgaacatggatataggcgccatgctagatttgcttggt
gttgttacatcagttagcacttcttctacagtaacaaggaagaatggtgtgaaaacctcg
aaaagagtcctccaactgaaggacatgtctggttgcagcgtggaaacaaccctttggggt
aacttctgtgatgctgaaggtcagcagctgcagttgctgtgtgattctggttcgagtcct
atacttgccctgaaaagtggccgcatttgtgacttcaacggcaggtctgtgggcacaatc
agctcaagctgcttaaaaataaatccagacggtcctgaagcagaaaggctgaggcaatgg
tacataactgaaggcaaaaatgctgctgtcacttcgttgtctgtgggaatgtcaagcatg
ggccggactgatgtccgaactactattgcacagatcaaggaagaaggcatgggaaaatca
gagaagccagactggatcactgttatgggtacagtttggaacatcaagaccgacaatttt
tgttatccagcttgcaccggagtggttaatggtacccgctgcactaaaaaagtcacaaaa
gatgttgatgagatgtggcaatgcgagagctgtgaacagagctctcaaaattgcgagtat
aggtacatgctgccatgcaaaatccaggatcacactggatctactatgtatgcaactgca
ttccaagatgctggcgaggagataattggcctcccagcgcaagatcttttcacgataaaa
aatgaagatcaagatgatgaaaagtttgcagaaatcatacagcgggcccgttatcagcat
tacttattcaagctgaaagttaaggaagaaacgtacaacgacgaagcgcgtgtgaaatgc
accattgttaaggttcaaaaattggacgacacggcaaaggagagtcgctttcttctggga
gtaatcgatagccttttggcggaggatggctcaggctcaacccctgcggtgaatggcggt
gctgctagtaacgctggtttcacatccaacaatacctacaccatgaatatgggtttccca
aatcagtttgggcagcaagcgagcttatatggtgggatgccttctacaccatctgcaaca
cgatatgcacagactggtcatgtctctagggactctccagtgcaggcaaactcctacggc
ccttcagctggcaacaccagtactagtctatgctatatgtgcagtcagcctgggcacttc
gctagagactgtccggtgcaggctgctgctccccggcgccagacttacggaaacggtgct
gctacatcaggatacaacaggcagtccaatgctggtaatttctga
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