Lolium perenne (perennial ryegrass): 127345776
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Entry
127345776 CDS
T08650
Name
(RefSeq) flowering time control protein FY
KO
K15542
polyadenylation factor subunit 2
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127345776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127345776
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127345776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Vps41
PEP5_VPS11_N
WD40_like
WD_LRWD1
B-prop_COPA_B_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
127345776
NCBI-ProteinID:
XP_051228255
LinkDB
All DBs
Position
3:complement(328272894..328279536)
Genome browser
AA seq
692 aa
AA seq
DB search
MMQQQQQPPPPPPPQHPPPQQPGGGDFYRGPLQPPMRQLSAASSTNLPPDYAAHPGAPPP
HQQQQQQQQPFDAYGDSFGAKRMRKPVQRRTVDCTSSLVRYAQARMWQRDARDRFTLQPT
AAAVVDMLPSVAYPDNPSTSFASKFVHSSINKNRCSINCVVWTPTGRRLITGSQSGEFTL
WNGQSFNFEMILQAHDQAVRSMIWSHNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRES
VRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGK
DYLVKLWDAKSGRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQVIKLYDIRSMKELESF
RGHNKDVTALAWHPFHEEYFVSGSYDGGIFHWLVGHETPQIEISGAHDNSVWDLAWHPVG
YLLSSGGNDHATRFWCRNRPGDTSRDKFNGGQFQGNDQRSGFVVHGPGGFQMPEPTPGPF
GGAIPGIDAQSIPGLPGLPPGPPPLPPGPHPSLLSTGQQQHYQQMPQLQHQFRPPPPNMP
QLQPPAHMLPHQQGPRPSLPQLSSMPGQSPVNPPLPPMPHPMAMQGSSNQMMPQMPQHLI
GMNQTHPGSGPPNNMPPMGGFPNGMGNIQGAPGSSGMQNFPMGGMYNRPQGQMAPQGQMS
IPGLGSYQPGMGNVGLPPPPPQHPPPRGAAPQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagcagcagcaaccgccgccgccgcctccgccgcagcacccgccgccgcag
cagcccggcggcggggacttctaccgcggcccgctgcagccgccgatgcgccagctctcc
gccgcgtcctccaccaacctcccgcccgactacgccgcgcacccgggagccccgccgccc
catcagcagcagcaacagcaacagcagccgttcgacgcttacggcgacagtttcggcgcg
aagaggatgcggaagcccgtgcagcggcggacggtggactgcaccagctcactggtccga
tacgctcaggctcgcatgtggcagcgggatgcgagggacagattcacgttgcagccgact
gcagctgctgtcgtcgacatgttgccatctgtcgcatacccagacaacccctcgacaagt
tttgccagcaaatttgttcattcatctatcaataagaaccggtgctccataaactgtgtc
gtgtggactcctacaggccgccggcttattactggatcccagagtggtgaatttacccta
tggaatggacaatcttttaattttgaaatgattcttcaggctcatgatcaagctgtgaga
tcaatgatttggagtcacaatgaaaattggatggttacaggggacgatggtggtgcaata
aagtattggcaaagtaacatgaataacgttaaagtgaataaaactgcccatagagaatca
gtccgtgacttgagcttctgtagaacagacttgaagttctgttcgtgttctgatgacaca
actgtgaaggtttgggactttgcaagatgccaagaagaaagatctttaactggccatggt
tgggatgttaaaagtgtcgattggcatcccacaaaatctttattggtctcaggtggtaaa
gactatcttgtgaaactctgggatgcaaaaagtggtagagagctacggtcattccatggt
cataaaaacattgtgcagtgtgtaaagtggaatcagaatgggaactgggtattgactgcc
tctaaggatcaggttatcaagttatatgatattagatccatgaaagagcttgaatccttc
cgtgggcacaataaggatgtaactgctttggcatggcatccgtttcacgaagaatacttt
gttagtggaagttatgatggaggaatctttcattggttggtcggccatgaaacccctcag
atagaaataagtggtgcacatgacaatagtgtctgggaccttgcttggcatccagtgggc
tatctactttccagcgggggcaatgatcatgctacgagattctggtgtagaaacaggcct
ggtgataccagccgtgataaattcaatggtggacagtttcaaggtaatgaccaacgctcc
ggttttgttgttcatggtccgggtggattccagatgcctgaaccaacacccggaccattt
ggtggtgcaattcctggtatagatgcccaatctatacctggtcttcctggtcttccacct
ggcccgcctccgttgccaccaggtcctcatccatctcttctatccactgggcagcagcaa
cactatcaacagatgcctcagctgcaacatcagttcaggccaccacctccaaacatgcct
cagctgcaaccaccagcacacatgcttcctcatcaacaaggacctcgaccatcacttcct
cagctttcatcgatgccagggcaatcgccagtgaacccaccactaccgccgatgccacac
ccgatggcaatgcaaggttcgtcgaaccagatgatgcctcaaatgccacagcacttgatt
ggcatgaatcagacgcatcctggttccggccctcccaacaatatgcctccgatgggtggc
ttcccaaacggaatggggaacatccaaggtgcaccaggttcttccggcatgcagaacttc
cctatgggtggcatgtacaaccggcctcagggacaaatggctccacaagggcaaatgtca
attcctggtctaggttcctaccaacctgggatgggcaacgttggccttccaccaccgcca
ccacagcaccccccacctcgcggtgcagcaccgcaataa
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