Lolium perenne (perennial ryegrass): 127346872
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Entry
127346872 CDS
T08650
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03082
ATP-dependent chromatin remodeling
lper03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127346872
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127346872
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lper01009
]
127346872
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127346872
03036 Chromosome and associated proteins [BR:
lper03036
]
127346872
Protein phosphatases and associated proteins [BR:
lper01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127346872
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127346872
SWI/SNF complex
127346872
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127346872
PBAF complex
127346872
SWI/SNF complex
127346872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GP70
Motif
Other DBs
NCBI-GeneID:
127346872
NCBI-ProteinID:
XP_051229083
LinkDB
All DBs
Position
1:complement(36922637..36927393)
Genome browser
AA seq
238 aa
AA seq
DB search
MKTVSMGAPRSSTVKFRMPTRDNLVPIRVDVEVDGQRYRDAFTWNPRDPDSEIMSFAKRT
AKDLKLPTSFVPQMFHSIQGQLADFRSYEGQDMQVKEKIVPLKIDLRVNNTIVRDQFLWD
IGNLESDPEEFARTLCDDLNITDPEVGPAIAVSIREQLYEIASQSVSAMREAKMSKKRRA
PEFASNSKAMNNAVDMFKYFGSKGSVIRKRKEWYLYAPVVDVISNEKTVVVAKDEAKL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtgagcatgggcgcccccaggtcctccaccgtcaagttccgcatgccgacg
agggacaacctggtgccgatacgcgtcgacgtcgaggtggacggccagcgctaccgggac
gccttcacctggaaccctcgcgatcccgactcagagatcatgagcttcgccaagaggacg
gccaaggacctgaagctgccgaccagcttcgtcccccagatgttccactccatccagggg
caattggccgactttcgttcctacgaggggcaggatatgcaggtcaaagagaagattgtg
cccctcaagattgacctccgggtgaacaacactatagtgagagaccagttcttgtgggat
ataggcaaccttgaaagcgatcctgaggaatttgcaaggaccttatgtgatgatttgaac
attacagatcctgaagttgggcctgctatagctgtttccatccgcgagcagctttatgag
attgctagtcagagtgtttcagctatgagagaagctaaaatgtcaaagaagaggcgagca
ccagaatttgcttcaaatagtaaagccatgaataacgcagtggacatgttcaagtatttt
ggaagcaaagggagcgtcatccggaaaaggaaggagtggtacctgtatgcacctgttgtt
gatgtaatttctaacgagaaaactgtagttgttgcaaaggatgaagctaagctctag
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