Lolium perenne (perennial ryegrass): 127347159
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Entry
127347159 CDS
T08650
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03030
DNA replication
lper03420
Nucleotide excision repair
lper03430
Mismatch repair
lper03440
Homologous recombination
lper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127347159
03420 Nucleotide excision repair
127347159
03430 Mismatch repair
127347159
03440 Homologous recombination
127347159
03460 Fanconi anemia pathway
127347159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127347159
03032 DNA replication proteins [BR:
lper03032
]
127347159
03400 DNA repair and recombination proteins [BR:
lper03400
]
127347159
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127347159
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127347159
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127347159
MMR (mismatch excision repair)
127347159
DSBR (double strand breaks repair)
HR (homologous recombination)
127347159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
RADX
RMI1_C
DUF223
Motif
Other DBs
NCBI-GeneID:
127347159
NCBI-ProteinID:
XP_051229343
LinkDB
All DBs
Position
1:complement(39268508..39273107)
Genome browser
AA seq
712 aa
AA seq
DB search
MGGGMEVDLTHGAVAAMSRMVQGLRPVLQLEEAPRTTWIVGGHTELYGLVLSDGVHSQKG
LLATSLNGLVKAGLLRGGSVVRVLDYICNNSVENPRVIAVIQLEILQTECTLIGSPTFFD
ANASQPKLRSYSDSLGIHRHCMISRAEQGVTNIACYPDQSLFDSSNAARVEIMQRSYGLV
PTPNTIDAKMQQLSLKSYQSQVPSTVGGFDSPGNTYGQPVQSLCEQAPPMYLNRYPVVNS
EAHLIPISALTPYQGRWTIKARVTGKTEPGYLGKAKIFSFDLLDANGGQIRAIGLNSAID
LFYDKIVPGNVYLISGGLVKPVPKMLSPLNSDYQIILVPTTSIEIYSGDDSGIPGQKHNF
RQISEIANMEKDAMVDLLGVVTSVSPSVTIVQNALKTHKRTIQLKDMSGRAMAITLWGNS
CSAEGQQLELQLKSGLNPILSLKSGIVVSGFSGKSVGTTSSSQLKINPDLPETEKLRQWY
ATQSKNNVCRTITQIKEENFGMLGQPGLITVVASISYVHTDAFCYPACTLMFNGKQCNKK
VTANGDGWWCKRCLRSSETCDYRYLLMCQIQDHSGSSYATAFHEAAEEMIGHTAQELYMI
QNNEQDAAKVEEILRGILWRKYLFKLRVKEGARHGVKLGIVKAEKFDPSDMSRHVLGEID
NLFKGNSTSASGTQGMVTPSVGRTNLQAGMTAQTSNNASGSTAIGGASSMIQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggggggcgggatggaggtggacctgacccacggggcggtggcggcgatgtcccggatg
gtgcaggggctgcggccggtgctgcagttggaggaggcgccgcggacaacgtggatcgtg
ggtggccacacggagctctacggcctcgtgctctccgacggcgtgcactcccagaagggg
ctactcgcgacctccttgaacggcctcgtcaaggccggcctcctccgcggcggctccgtc
gtccgcgtcctcgactacatctgcaacaactccgtcgagaacccgagggtcattgctgtt
atccaactggaaatactgcaaactgagtgcacgctgattgggagtcccacattctttgat
gctaatgcctctcaacctaagttgagatcatattctgatagcctgggcatccataggcat
tgtatgatctcgagggccgaacaaggtgttaccaacatagcatgctatcctgaccagagc
ttgtttgattcttctaatgctgcaagggtagagattatgcagcgatcttatggtttagtg
cccacaccaaacacaatagatgccaagatgcagcagctttcactgaaatcttatcagagc
caagttccttcaacagttggaggctttgacagtcctggcaatacttatgggcagcctgtg
cagtctttgtgtgaacaagcacctccaatgtatttgaatagataccctgtcgttaacagt
gaagctcatctcatcccaatttctgcgttaactccataccaaggcagatggacaatcaag
gccagggtaactggaaagactgaaccaggctacttaggcaaagcaaaaatcttctctttt
gatctgcttgatgcaaatggtggacaaattcgtgcaataggtttaaattcagccattgac
ctgttctacgacaaaattgtgcctggaaatgtgtacttgatatctggaggattggtaaaa
cctgtaccaaagatgctcagccctttaaacagtgattatcagattattctggttcctaca
acatctatagaaatttattctggtgatgatagcggcatccctggacagaaacacaatttt
agacagatcagtgaaatagcaaatatggagaaggatgccatggtagatttgcttggggtt
gttacatcagttagtccttcagtgacaatagtacagaatgccttaaaaacccataaaaga
accattcagctgaaggacatgagtggtcgggctatggcaataaccctctggggaaactct
tgtagtgctgaaggccagcagctggagctgcagttgaaatctggtttgaaccctatactt
tccttgaagtctggcattgtcgttagcggattcagtggcaagtctgtgggtacaaccagc
tcaagtcagctaaaaataaacccagacttacctgagacagaaaagttgaggcaatggtat
gcaactcagtcaaagaacaatgtttgcagaaccattacgcaaatcaaggaggagaacttt
gggatgctaggtcaacctggcttgatcactgttgtggcttcaatttcgtatgtacacacc
gatgccttctgctacccagcttgcaccttgatgtttaacggtaagcaatgcaacaaaaag
gtcacagctaatggtgatgggtggtggtgcaagagatgtctccggagctccgaaacttgt
gactataggtacttgcttatgtgtcagatccaagaccacagtggttcttcctacgctact
gccttccatgaggcggctgaggagatgattggccataccgcacaagagctttatatgata
caaaataacgagcaagatgctgcaaaagtcgaggaaatcctgcgggggatcctttggcgt
aaatacctgttcaagttgagagtcaaggagggagccaggcacggtgtgaagcttggcata
gttaaggctgagaagtttgacccgtcggacatgagtcgtcatgtcctcggagagattgac
aacctttttaagggtaattcaacctcagcttcagggacacaaggcatggtgaccccaagt
gtcggtcgcaccaatttgcaggccgggatgaccgctcaaacctccaacaatgcctctggc
agcacggccatcggtggcgcaagttcgatgatccagtag
DBGET
integrated database retrieval system
