Lolium perenne (perennial ryegrass): 127347809
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Entry
127347809 CDS
T08650
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Module
lper_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127347809
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
127347809
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
127347809
NCBI-ProteinID:
XP_051229918
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Position
4:311826074..311827414
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AA seq
446 aa
AA seq
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MASRKIVLAVLFLLLLFIFPAIAFAFTGGMHTESVHRRLGERSVKADTLSNRPVQRHRKL
GQETKPPPDAEFNVVSYGAVGDGKTDDTPAFRKAWAAACSSSKPATMLVPKEKEFLVKQT
TFSGQCKSGVRFKLDGTLVAPGRSSWPKENMNKWITFNNVDKLTVSGEGTMDGKGEVWWK
NSCRIDKNLKCTEAPTALLLSKCNHLKVENIRLLNSQQMHMSVEDCKDVVLKHITIVAPG
DSPNTDGIHIARTKDIQVMDCNIKTGDDCMSIETGTENLYASKITCGPGHGISVGSLGDK
NSEARVSNITINKAHLIGTTNGARIKSWQGGKGYAKDITFEDIIMDKVKNPIIIDQNYCY
MDDPLQPKACKKQTSAVELSNIQFKNIRGTSGTKEAIKLDCSDTIPCHDLVMQDVKLTFS
GKGKGATSTCKNAKLKKSDNVIPKTC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcgcaagatcgtcctggcagtgcttttcctgctgttattgttcatcttcccg
gcaattgcctttgcatttacaggcggcatgcatacagagtccgtgcaccgcagactggga
gagaggagcgtcaaggccgatacgctaagcaacagacctgtccagcgacatcgcaaactt
ggtcaagagaccaagcctcctccggacgccgagttcaacgtggttagctacggagccgtt
ggcgatggcaaaactgatgacaccccggcgtttcggaaagcctgggccgcggcctgctca
tcgtctaagccagccaccatgttggttccgaaggagaaggaatttctcgtcaagcagacc
accttctcggggcagtgcaagtcgggcgtcagattcaagctcgacggaacgttggtagct
cccggacgatcatcttggccgaaggagaacatgaataagtggatcacgtttaacaacgtt
gataagctaaccgtgtcgggcgaagggactatggacgggaaaggtgaagtctggtggaag
aactcgtgccgaatcgacaagaacctcaagtgtacagaggcccccacggcgttgttgctc
agcaagtgcaatcacttgaaggtagaaaatatcaggctcttaaacagccagcaaatgcat
atgtccgtcgaagattgcaaggacgtagttctaaagcatatcacgattgttgcgcccgga
gacagccctaataccgatggcatccacattgcccgcacgaaggatatacaagtcatggat
tgcaacattaaaactggagacgattgcatgtctatcgagaccggaactgagaacttgtac
gcctcaaagataacatgcggcccgggtcacggaatcagcgttggaagcttaggtgacaaa
aattctgaagctcgtgtttccaacataactatcaacaaagcacaccttattggcacgacg
aatggtgcacgcataaagtcgtggcaaggaggaaagggatatgccaaggacatcacattt
gaggatatcatcatggacaaggtcaagaatccaataatcatcgaccaaaattattgctat
atggatgatcctttgcagcccaaggcatgcaagaaacaaacttcggcggtggagctaagt
aatatccagttcaagaatataagaggcactagtggaacaaaagaagctatcaagctagac
tgcagcgacaccatcccatgccatgatctagtgatgcaggatgtaaaacttaccttcagc
ggaaaaggcaaaggtgctacaagtacatgcaagaacgctaagctaaagaaatcagacaat
gtcattccaaaaacatgctga
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