Lolium perenne (perennial ryegrass): 127348318
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Entry
127348318 CDS
T08650
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Module
lper_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127348318
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
127348318
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
127348318
NCBI-ProteinID:
XP_051230343
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Position
4:39925609..39927042
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AA seq
412 aa
AA seq
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MASSTSAKLVWSPLLALLLLSVCDASSVEQPEDTSVVFSIENYGARGDGKHDDTQALAKA
WSAACSSSRPVVLLVPKGKSYLTKSTTLSGPCKSTVVFTVKGTLVAPPSRSDWTENNIRH
WIMFQGISGLTVTGGGTINGNGQIWWKNSCKTNEALPCTQAPTALTFHLCDNLKVDNLKI
VDSQQIHMSIEDCTDVQLTRMSITAPSTSPNTDGIHITRSKDVQVRECIIKTGDDCMSIE
DGTQNLHVTKVVCGPGHGISIGSLGDDNSRAEVSGITIDSVQLYGTTNGARIKTWQGGSG
FAKNIIFQNIIMDNVQNPIIIDQNYCDSAKPCKNQESAVEISNIVFKNIRGTTTSKDAIK
LSCSKNAPCSGITLENIELKLEGGNGDTESTCQNAKWTESGNVVPSPCKGNN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcaacgagtgctaagctcgtgtggtctcccctgctcgcgctgctcttgctg
tccgtctgcgatgctagctcagtggaacagcctgaggacacctccgttgtgtttagcatc
gaaaactatggcgctcggggcgacgggaagcacgacgacacgcaggccttggcaaaggcg
tggagcgcggcgtgctcctcttcccggccagtcgtgctgctcgttcctaagggcaagagc
tacctcaccaagtccaccactctttctggcccatgcaaatccacagtcgtcttcaccgta
aaaggcacgctggtagctcctccgagccggtcagactggactgaaaacaacatcaggcac
tggatcatgttccaaggaatatccggtctcactgtcaccggtggcggcacaatcaacggc
aatggccagatttggtggaagaactcatgcaagaccaatgaagctttgccatgcacacag
gctcccactgctttgacatttcacctatgcgacaatctgaaggtggacaacctgaaaatt
gtcgacagccaacagatccatatgtcgatagaggattgcaccgacgtgcaattaacccgc
atgtctatcacggcgcccagcacaagcccgaacaccgatggcatccacatcacgcgctcc
aaagatgtgcaagttagagagtgtatcatcaagaccggagatgactgtatgtcgattgag
gatggaactcagaatcttcatgtcaccaaagtcgtgtgtggtcccggacatggcatcagc
attggaagtttgggagatgacaactctagagcggaggtttccggcattacaattgactcg
gtgcaattatatggcacgaccaacggtgcccgaatcaagacatggcagggcggaagtggg
ttcgcgaagaatatcatatttcagaacattatcatggacaatgttcaaaatccaattatt
attgaccagaactactgcgactcagctaagccatgcaagaaccaagaatcagcagtggag
attagcaatatcgtgttcaagaacattagagggactaccacttccaaggatgccatcaag
ttgagttgcagcaaaaatgcaccgtgctctggtataacccttgagaacattgaattgaag
ttagagggtggcaatggtgacaccgaaagcacctgccagaatgcaaaatggacagaatct
ggaaatgttgttccatcaccttgcaaaggcaacaactag
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