Lolium perenne (perennial ryegrass): 127348375
Help
Entry
127348375 CDS
T08650
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127348375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127348375
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127348375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
LRR_4
F-box_5
LRR_8
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
127348375
NCBI-ProteinID:
XP_051230382
LinkDB
All DBs
Position
1:complement(44836009..44840600)
Genome browser
AA seq
586 aa
AA seq
DB search
MGRAGGPAAPPWHSLPDEVWEHAFSFLPADADRGAAACACHGWLRAERRSRRRLVVPNCY
ATDPRDAVDRFPSVRAAEVKGKPHFADFGLLPPSWGAYAAPWVAAAADGWPLLEELSFKR
MFVTDECLEMIASSFRNFQVLRLNSCEGFTTAGLAAITEGCRNLKELDLQENYIDDCSSH
WLSNFPECYTSLEALNFSCLHGEVNFTVLERLVSRCRNLKTLKLNNAIPLDNVASLLRKA
PQIIELGTGKFSADYHPDLFAKVEAAFAGCTSLRRLSGTWDAVPDYLPAFYCVCEGLTSL
NLSYATVQGPELIKFISRCKNLLQLWVMDLIEDHGLSVVASSCSKLQELRVFPSDPFGHN
GGQVFLTERGLVDVSASCPKLESVLYFCSRMTNEALVMIAKNRPNFTCFRLALLEPRSPD
YITRQPLDAGFSAIVESCKGLRRLSMSGLLTDLVFKSIGAHADRLEMLSLAFAGDSDLGL
NDILSGCKSLKKLEIRDCPFGDKALLANAAKLETMRSLWMNSCSLTVGGCRLLALKMPHL
TVEIINDPGETCPVESLPFDSPVEKLYVYRTLAGPRSDTPDCVQIV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgccggcggccccgccgcgcccccgtggcactctctcccggacgaggtctgg
gagcacgccttctccttcctccccgctgacgccgaccgcggcgccgccgcctgcgcctgc
cacggctggctccgcgccgagcgccgctcccgccgccgcctcgtcgtgcccaactgctac
gccaccgacccgcgcgacgccgtcgacaggttcccctccgtccgcgccgccgaggtcaag
ggcaagccgcacttcgccgacttcggcctcctgccgccctcatggggcgcctatgccgcg
ccctgggtcgccgccgccgccgacggatggccgctgctcgaggagcttagcttcaagcgc
atgttcgtcaccgacgagtgccttgagatgatcgcgtcatccttcaggaacttccaggtc
ctgcgactaaactcgtgcgagggattcaccaccgccggactcgccgccattaccgaaggc
tgcagaaatttaaaagaacttgacctgcaagagaactacattgatgattgttcaagtcat
tggctcagcaactttccagaatgctatacttctctggaagctctgaatttttcatgctta
cacggggaggtcaatttcactgtacttgagaggctagtaagcagatgccgcaacctcaag
actctgaagctcaacaatgcaatccctcttgacaatgttgctagcctgcttcgtaaggct
ccgcaaataatagaactcggaactggcaaattctctgcggactatcatccagatcttttt
gcaaaggttgaagcagcatttgcaggttgtacaagccttagaaggctttctgggacttgg
gatgctgttccagattacctgccagcattctattgtgtatgtgaaggcctcacatctctt
aatctgagttatgccaccgtgcaaggccctgagctcatcaaattcattagcagatgcaag
aatctgctgcagttatgggtgatggacctcattgaggaccatggtctatctgttgtggca
tcaagttgcagtaaactgcaagagttgcgggtcttcccttccgatccttttggtcataac
ggcgggcaagttttcttgaccgaaagaggtcttgttgatgtttctgccagttgtcccaaa
ttggagtcagttctttacttctgcagccggatgacgaatgaggctcttgttatgattgca
aagaaccgtccaaacttcacttgcttccgcttagccctccttgagccccgttctccggat
tacatcacacggcagcctcttgatgctggtttcagtgccattgttgaatcatgcaagggg
cttaggcgcctctctatgtctggtcttctcacagatcttgtattcaaatcaatcggtgca
catgctgatcgtcttgagatgctatcactcgcatttgctggagacagcgatctaggcctg
aatgacatcctctctggctgcaagagcctgaagaagctagagatcagggactgcccgttt
ggggataaagcgttgctggcaaatgctgccaagctggagacaatgcgatccctttggatg
aactcgtgctcgttgaccgtgggcgggtgccgactgcttgcactcaagatgcctcacctt
actgtggagataataaacgatcctggagagacatgtccagtggagtcactcccgtttgat
agccctgtcgagaaattgtatgtctaccggactcttgcaggtccaagatctgacacacca
gactgtgtccagattgtttag
DBGET
integrated database retrieval system
