Lolium perenne (perennial ryegrass): 127349033
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Entry
127349033 CDS
T08650
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Module
lper_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127349033
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
127349033
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Insc_C
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
127349033
NCBI-ProteinID:
XP_051230809
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Position
4:311725115..311727838
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AA seq
452 aa
AA seq
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MNIRALIPRGMASRKVILAVLFLLLLFIFPAIAFAFTGGMHTESVHRRLGERSVKADTLS
HRPVQRHRKLGQETKPPQDAEFNVVSYGAVGDGKTDDTPAFQKAWAAACSSSTPATMLVP
KEKNFLVKQTTFSGQCKSSVRFKLDGTLVAPGRSSWPKANMNKWIMFSNVDKLTVSGEGT
MDGKGKVWWKNSCRVDKNLKCTKAPTALLLSKCNHLKVENIRLLNSQQMHMSVKDCKDVV
LKHITIVAPGDSPNTDGIHIARTKDIQVMDCNIKTGDDCISIETGTENLYASKITCGPGH
GISVGSLGDKNSEARVSNITINKAHLIGTTNGARIKSWQGGKGYAKNITFEDIIMEKVKN
PIIIDQNYCDMMPKACKKQTSAVELSNIQFKNIRGTSGTKEAIKLDCSDTIPCHDLVLQD
VKLTFSGHGKGATSTCKNAKLKKSDNVIPKTC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacgcgcacttatacctcggggcatggcatctcgcaaggtcatcctggcagtg
cttttcctgctgttattgttcatcttcccggcaattgcctttgcatttacaggcggcatg
catacagagtccgtgcaccgcagactgggagagaggagcgtcaaggccgataccctaagc
cacagacctgtccagcgacatcgcaaacttggtcaagagaccaagcctcctcaggacgcc
gagttcaacgtggttagctacggagccgttggcgatggcaaaactgatgacaccccggcg
tttcagaaagcttgggccgcggcttgctcatcgtctacgccagcaaccatgctggttccg
aaggagaagaactttctcgtcaagcagaccaccttctcggggcagtgcaagtcaagcgtc
agattcaagctcgacggaacgttggtagctcctggacgatcaagttggccgaaggcgaac
atgaacaagtggatcatgtttagcaacgttgataagctaaccgtgtcaggcgaagggacc
atggacgggaaaggcaaagtatggtggaagaactcatgccgagtcgacaagaacctcaag
tgcacaaaggcccccacggcgttgttgcttagcaagtgcaatcacttgaaggtagaaaat
atcaggctcttaaacagccagcaaatgcatatgtccgtcaaagattgcaaggacgtagtt
ctgaagcatatcacgatcgttgcgcccggagatagccctaataccgatggcatccatatt
gcccgcacgaaggatatacaagtcatggattgcaacattaaaaccggagacgattgcata
tccatcgagaccggaactgagaacttgtatgcctcaaagataacatgcggcccgggtcat
ggaatcagcgtcggaagcttaggtgacaaaaattctgaagctcgtgtttccaacataact
atcaacaaagcacacctcattggcacgacgaatggtgcccgcataaagtcgtggcaagga
ggaaagggatatgccaagaacatcacatttgaggatatcatcatggaaaaggtcaagaat
ccaataatcattgaccaaaactattgcgatatgatgcctaaggcatgcaagaaacaaact
tcggcggtggagctaagtaatattcagttcaagaatataagaggcacgagtggaacaaaa
gaggctatcaagctagactgtagtgacaccatcccatgccatgaccttgtgctgcaagat
gtgaagcttacgttcagcgggcatggcaaaggtgctacaagtacatgcaagaacgcgaag
ttaaagaaatcggacaatgttattccaaagacatgctga
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