Lolium perenne (perennial ryegrass): 127349141
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Entry
127349141 CDS
T08650
Name
(RefSeq) cell division control protein 48 homolog D-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127349141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127349141
03009 Ribosome biogenesis [BR:
lper03009
]
127349141
04131 Membrane trafficking [BR:
lper04131
]
127349141
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lper04147
]
127349141
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127349141
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127349141
Membrane trafficking [BR:
lper04131
]
SNARE
SNARE associated proteins
Others
127349141
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127349141
Exosome [BR:
lper04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127349141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
AAA_5
AAA_33
AAA_14
AAA_22
CDC48_2
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Parvo_NS1
AAA_18
ATPase_2
ABC_tran
IstB_IS21
AAA_7
Viral_helicase1
NB-ARC
AAA_24
TsaE
Zeta_toxin
Vps4_C
NACHT
DUF815
ResIII
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
127349141
NCBI-ProteinID:
XP_051230880
LinkDB
All DBs
Position
4:complement(367747203..367749551)
Genome browser
AA seq
782 aa
AA seq
DB search
MASTSSSKKAANRLVVEEATVDDNSICNLHPATMDRLSIFHGDIVLLKGKRRRTTVCVVH
PDDTCEEHKLKINKVSRSNLRVRIADVVSVHLCPDAKYGKRVHVLPVDDTIEGITGNLFE
AYLKPYFVDAYRPVHKGDLFLVRGGMRSVEFKVIDIDPAVDYCVVAGDTEIFCDGEPVKR
EDEERLDDVGYDDVGGMGKQMNQIRELVELPLRHPQIFKTLGVKPPKGILLYGPPGSGKT
LIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK
REKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP
DEVGRLEVLRIHTKNMKLSEDVNLEVVAKDTHGYVGADLAALCTEAALQCIREKMDVIDL
EEDTIDAEILNSMAVTNDHLKTALVGTNPSALRETVVEVPNVSWSDVGGLDNVKRELQET
VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF
GESEANVREIFDKARQSAPCVLFFDELDSIAMQRGGNVGDAGGAADRVLNQLLTEMDGMN
AKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVDL
GALARFTTGFSGADITEICQRACKYAIREDIEKDIEKQRSGMEVDGGQEDEVAEIKAAHF
EESMKYARRSVSDSDIRKYQSFAQTLQQSRGFGTEFHFPAQPQASVNAFDTAVAPAEDDL
YN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacgtcgtcttcgaagaaggcggcgaaccggctggtggtggaggaggccacc
gtggacgacaactccatctgcaacctccacccggccaccatggaccgcctctccatattc
cacggcgacatcgtgctgctcaagggcaagcgccgccgcaccaccgtctgcgtggttcac
cccgatgacacctgcgaggagcacaagctcaagatcaacaaggtgtcccgctccaacctc
agggttcgcatcgccgacgtcgtgtccgtgcacctctgccccgacgccaagtacggcaag
cgcgtgcacgttctccccgtcgacgacaccatcgagggcatcacgggcaatctattcgag
gcctacctcaagccctactttgtggacgcctaccgcccggtgcacaagggcgacctcttc
ctcgtgcgcggtggcatgcggagcgtcgagttcaaggtcatcgatatcgaccctgcggtc
gactactgcgttgtggcgggggacacggagatcttctgcgacggggagccggtgaagagg
gaggacgaggagaggctcgacgacgtcggctatgacgacgtgggcggcatgggcaagcag
atgaaccagatcagggagctggtcgagctgccgcttaggcatccgcagattttcaagact
cttggcgtgaagcctcccaagggcatcctcttgtacggccctcctggctccggcaagacg
ttgatcgctcgtgcggtggcaaacgagacgggggccttcttcttctgcatcaatggcccc
gagatcatgtccaagatggctggcgagagcgagagcaacttgaggaaggcatttgaggag
gccgagaagaacgctccatccatcatcttcatcgacgagatcgactccattgctccaaag
agggagaagacacatggcgaggtggagaggcgcatcgtgtcccagctgctgacgctcatg
gatgggatgaaggcacgagcacacgtcatagtaatgggtgccacgaatcgtcccaacagc
attgatcccgctctcaggcgcttcgggaggttcgaccgcgagattgacattggcgtgccg
gacgaggttgggcgccttgaggttctgcgcatccacaccaaaaatatgaagctctcggag
gacgtcaacctagaagtggtggccaaggacacgcacggctatgttggtgccgacttggcc
gcgctctgcaccgaggcggcgctacaatgcatcagggagaagatggatgtgatcgacctc
gaagaagacacaatcgacgctgagatcttgaactccatggccgtgaccaacgaccacctc
aaaacggctcttgttggcaccaatccttcggctcttcgtgagaccgtcgtggaggtgccc
aatgtcagctggagcgacgtcggtggcctcgacaacgtcaagagggagctgcaggagacc
gtccagtaccccgtggagcaccccgaaaagtttgagaagttcggcatgtcaccttccaag
ggtgtcctcttctacgggccaccgggctgcgggaagacgcttctggccaaggcgatcgcc
aacgagtgtcaagccaacttcatcagcatcaaggggcccgagctgctcaccatgtggttc
ggcgagagcgaggccaacgttcgtgagatatttgacaaggcgaggcagtcggctccgtgc
gtgctcttcttcgacgagctcgactctatagcgatgcagcgcggtggcaacgtgggagac
gccggtggcgcggcggacagggtccttaaccagttgctgacggagatggatggcatgaac
gccaagaagacggtgttcatcatcggcgccacaaacaggccggatatcatcgactcggcg
ctgctccgtcccggacgccttgaccagctcatctacatccccttgccagacgaggcctcg
cgacaccagatcttcaaggcttgcctcaggaagtctcccgtggccaaggacgtcgacctt
ggtgcgctcgcgaggttcacgacaggtttcagtggcgccgacatcaccgagatttgccag
agggcgtgcaagtatgccattagggaagacattgagaaggatatcgagaagcagaggtcg
ggcatggaggtggacggcgggcaggaagatgaagtggctgagatcaaggcggctcacttc
gaggagtcgatgaagtacgcgaggaggagtgtgagcgacagcgacatcaggaagtaccag
tcgttcgctcagacgctgcagcagtccaggggcttcggcactgagttccacttcccggcg
cagccacaagcttctgtcaacgccttcgacaccgccgtggcacctgctgaggacgatctg
tacaactga
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