Lolium perenne (perennial ryegrass): 127349329
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Entry
127349329 CDS
T08650
Name
(RefSeq) probable tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lper03016
]
127349329
Enzymes [BR:
lper01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
127349329
Transfer RNA biogenesis [BR:
lper03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
127349329
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
DUF3136
DNA_processg_A
Motif
Other DBs
NCBI-GeneID:
127349329
NCBI-ProteinID:
XP_051231024
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Position
4:396555172..396556826
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AA seq
290 aa
AA seq
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MSGPRWKKGKDGKAFSALAAASPMSSIVTDLQSSLKRCRSVATISSHGEYAILGVSPHQA
ILLNQAAFGRFVENAGAEKQWFQLGAEEVFYLCHALKCVVVESERGKQMSEGEMWDLLCS
ASDSFPEMYKAYSHLRSKNWVVRSGLQYGADFVAYRHHPALVHSEFAVVVVPEGAQFGAR
CGRLKVWSDLLCALRASGSVAKTLLVLTISCSICELGSPDCLEQLVVHERTITRWIAQQC
REQRCEPCRVQPNKEEQGHTRETVVSNYWGVILGFTVLSTLLVYKLRFSQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtccgagatggaagaagggcaaagatggcaaggccttctcagctctagcagca
gctagccccatgtcaagcattgttaccgacctccagtcttcgctgaaacgctgtagatcc
gtggcaactatatctagccacggtgagtacgcgattcttggagtgagcccacatcaagct
atccttctgaaccaagctgcctttggccggtttgtggaaaatgccggagcagagaaacag
tggttccagctgggcgccgaggaggtcttctacctttgccatgctttgaagtgcgttgtg
gttgagtcggagagggggaagcagatgagtgaaggggagatgtgggatctcttgtgctcc
gcatcagactcgtttcctgagatgtacaaggcatactcacatctcagatcgaagaactgg
gtagtgcggtcaggtttgcagtatggtgcagattttgtagcttaccgtcatcacccagcg
ctagtccactcggagtttgccgtggttgtggttccggaaggagcgcagtttggcgctagg
tgtggccgcctgaaggtgtggtccgatctactgtgtgcactccgagcttctggcagtgtg
gccaagacactgctggttctgaccatctcctgcagtatctgtgaactggggtcaccagat
tgtttggagcagctggttgttcatgagaggacgattacaaggtggatagcgcagcagtgc
cgagagcagagatgtgaaccgtgcagagtacaaccaaataaggaagaacaaggtcacaca
agagaaactgtagtctcaaactattggggtgtaatactaggcttcacggttctttctacc
ctacttgtatacaagctgagattctcccaataa
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