Lolium perenne (perennial ryegrass): 127349428
Help
Entry
127349428 CDS
T08650
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127349428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127349428
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127349428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
127349428
NCBI-ProteinID:
XP_051231139
LinkDB
All DBs
Position
4:7070451..7075003
Genome browser
AA seq
236 aa
AA seq
DB search
MERAEGRKANQLRKYSCTRNPLGRAHGSARWEQGGTAVVAAVYGPRPGTRKGENPEKASI
EVVWKPMTGQSGRQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVMSDDGSLLPCAINA
SCAALAFAGIPLKHLAVAIGCGVLENGDVILDTSKAEEKQLKSFAHLVFPNSSKSVDLKE
SQQKDGQSERGLITSITHGVMSEEDYFNCIERGLAASSRISDFMRTTLQKHTPDYL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggagagggcggaggggaggaaggcgaaccagctgcggaagtactcgtgcacgcggaac
ccgctgggccgcgcgcacggctcggcgcgatgggagcagggcggcacggcggtggtggcg
gcggtgtacgggcccaggccgggcaccaggaagggggagaaccccgagaaggcgtccatc
gaggtcgtctggaagcccatgaccggccagagcgggaggcaggagaaggagtacgagatg
accctcaagaggacgctgcagagcatctgcctgctcactgtccaccccaacaccaccacc
tccgtcatactccaggttatgagtgacgatggttctctccttccatgtgcaattaatgca
tcatgtgctgcccttgcttttgctggcatccccttgaaacatcttgctgttgcgattggc
tgtggtgtcttggagaatggtgatgtgatattggacacaagcaaggcagaagagaagcaa
ctgaaatcgtttgctcacctggtgttccccaactcaagcaagtctgtcgatctgaaagag
tcacagcagaaagatggtcagtctgaacgaggcttgataacttctatcacccacggagtg
atgtctgaggaggattacttcaactgcattgagaggggtctggccgcatcctcacgtatc
tcggatttcatgaggacaaccttgcagaagcatacacctgactatctctga
DBGET
integrated database retrieval system
