Legionella pneumophila Lens (serogroup 1): lpl2125
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Entry
lpl2125 CDS
T00208
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lpf
Legionella pneumophila Lens (serogroup 1)
Brite
KEGG Orthology (KO) [BR:
lpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpf03016
]
lpl2125
Enzymes [BR:
lpf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
lpl2125
Transfer RNA biogenesis [BR:
lpf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
lpl2125
Prokaryotic type
tRNA splicing ligases
lpl2125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
CAH16365
Pasteur:
lpl2125
UniProt:
Q5WUP3
LinkDB
All DBs
Position
complement(2427035..2428465)
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AA seq
476 aa
AA seq
DB search
MDLSLLKKINDFEWQIPQHGKMLVPGVIFASEQLILDMDMKVYEQLSNVATLPGIVSAAY
AMPDAHWGYGFPIGGVAAFDPDEGGVISAGGVGFDISCGVRLLSTGLKRDELESVKASLA
DALFAHIPAGVGSRSGIHLTIKQLDDMMRGGAQWAVKQGYGEAADLERIEDRGCVEGAIP
DCVSEQAKKRQKNEMGTLGSGNHYLEVQEVRQIYCSDTATALNLHEGDIVVSIHCGSRGL
GHQIGTDYLRSMVIESQHYGIKLADRELACAPIHSKLGENYLGAMRAGINCALANREIIT
HFMRNVFQDILPRTQIDLIYDVSHNTCKEEFHEVDGKKKRLFVHRKGATRALGPGHPQLP
KAVSHIGQPVIIGGSMGTGSYVLAGVKGSEHKSFSSACHGAGRAMSRHQAMKKWNGKDIV
DKLAQQGILIRSGSYRGVAEEAPGAYKDVHSIVDAAEMSGLAKKVAKLIPIICVKG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagcctcttgaaaaaaataaacgattttgaatggcaaatacctcaacatgga
aagatgttggtgccaggagttatttttgcgtcagaacagctgattcttgatatggatatg
aaagtttacgaacaattatctaatgttgctactttgccgggaattgtttctgctgcttat
gctatgcctgatgcgcattggggatatggttttccgattggcggtgtcgctgcttttgat
ccggatgagggaggggtcatttcagcaggaggtgttggttttgacatttcatgcggggta
aggctcttatcgaccggattgaagcgagatgaattggagtctgtcaaagccagccttgca
gatgctttatttgcacatattccagcgggagtaggcagtagaagcggcattcatttaacg
ataaaacagctcgatgatatgatgcgggggggcgcacaatgggcagtaaaacaaggatat
ggtgaagctgctgatttagagcgtatcgaagatcgtggttgtgtcgaaggagctatccct
gattgtgtctctgaacaagctaaaaagcgccagaaaaatgaaatgggcaccttgggttca
ggtaaccattatctggaagtgcaggaagtcaggcaaatctactgttccgatacagcaaca
gctttaaatttgcatgaaggagatattgtagtgagtatccattgtggttccagaggattg
gggcatcaaattggtacagattacctccgttccatggttattgaatcacaacattatggt
atcaagctggcggatagggaattggcttgtgctcctattcattcaaagctaggggaaaat
tacctgggcgctatgagagcaggaattaattgtgctttagccaacagagaaatcatcact
cattttatgcgcaatgtatttcaggatattttaccccgcactcagattgatctcatctat
gacgtttctcacaatacttgtaaagaagaatttcatgaggtagatggcaagaaaaagcgc
ttatttgttcatcgaaaaggagcaactcgtgccttgggcccaggccatccacaactacct
aaagctgtttctcatataggccagcctgtgattattggagggagcatgggaacaggttcc
tatgtattagcaggcgtcaaaggttctgagcataaatcttttagctcggcatgtcatgga
gcaggtcgcgctatgagtcgtcatcaggcaatgaagaaatggaacgggaaagacatagta
gataaattggctcaacaaggaattttaattcgtagcggatcataccgtggggttgctgag
gaagctccgggggcttataaagatgttcattctattgtcgatgccgctgaaatgtcgggt
ttggcaaaaaaagttgctaaattaattcccatcatttgtgtcaaaggttaa
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