Legionella pneumophila Lens (serogroup 1): lpl2685
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Entry
lpl2685 CDS
T00208
Symbol
pnp
Name
(GenBank) Polynucleotide phosphorylase (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lpf
Legionella pneumophila Lens (serogroup 1)
Pathway
lpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lpl2685 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpf03019
]
lpl2685 (pnp)
03016 Transfer RNA biogenesis [BR:
lpf03016
]
lpl2685 (pnp)
Enzymes [BR:
lpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
lpl2685 (pnp)
Messenger RNA biogenesis [BR:
lpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
lpl2685 (pnp)
Transfer RNA biogenesis [BR:
lpf03016
]
Prokaryotic type
tRNA degradation factors
lpl2685 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
S1_2
Motif
Other DBs
NCBI-ProteinID:
CAH16926
Pasteur:
lpl2685
UniProt:
Q5WT40
LinkDB
All DBs
Position
complement(3063358..3065547)
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AA seq
729 aa
AA seq
DB search
MAKITKEIVFGNHKLILETGEVARQADGAVMASMNGTQVLVTVVWKKDGGESNDFFPLTV
NYQEKFYAIGKIPGGFNKREGRPSDNETLISRLIDRPIRPLFPDNFFNEVQIIATVLSLN
PEVSPDIIAMIGASAALSISGVPFNGPIGAARVGYKDGVYLLNPSRKEQEESKLDLVIAG
TKDAILMVESEAQELSEDIMRGAMLYGHEMMKNVIKSIEELARDVGKSKPEWKAPEIDTV
LKARINDVARNEVEAAYLIKDKQQRYQRLGELREQTISALLAENDELNADVIANMFGELE
RSIVRNRILDGEPRIDGRDHRTVRPISVRTKFLERTHGSCLFTRGETQAIVVATLGNERD
AQILDGISGESRDRFMLHYNFPPYSVGETGQVGSPKRREIGHGRLAKRALMAVLPDANEF
PYVLRIVSEITESNGSSSMATVCGTSLALMDAGVPLKAPVAGVAMGLIKEGDRYAVLTDI
LGDEDHLGDMDFKVAGTEKGITALQMDIKISGITNEIMERALEQALEGRTHILGVMNNAL
AEHRTELSQHAPRITTMKVAEDKIRTIIGKGGATIKGLIESTGVSIDIDDSGVIQLFSPD
KIALEEAQKQIKALIAEIEVGQTYQGKVSKIVDFGAFINLLPGKDGLLHISQICAARTQK
VEEVLQEGQEIEVFVAGIDKQGRVKLEWKDKPQAEAKEVEDAPVSATFLTMEEQSEEINS
GNKISEEEE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaattacaaaagaaatagtattcggtaaccataaattaatcttggaaacaggt
gaagtagcacgacaggctgatggtgccgtaatggcaagtatgaacggtacacaagtgcta
gtgactgtagtttggaaaaaggatggtggtgaaagtaatgattttttcccattaacagtg
aattatcaagaaaagttctatgccataggtaaaatcccaggtggctttaacaaacgtgaa
ggacggccatctgataatgaaacattaatttctcggttaatagatagaccgatccggcca
ttattcccggataatttttttaacgaagtacagataattgctactgtcctgtccttaaat
cctgaggtatctcctgatattatcgctatgattggagcctccgcagcgctttcaatttct
ggcgtgccatttaatggccctataggtgccgctcgagtaggctataaagatggcgtttat
ctgctcaatccaagtagaaaagaacaagaagagtccaagcttgatttggttattgcggga
acaaaagatgccattttgatggtggaatcagaagcacaggaattaagtgaagacatcatg
cgtggtgctatgttatatggccatgaaatgatgaaaaatgtcataaaatcaatagaagaa
cttgctagagacgtgggtaagagcaaacctgagtggaaagcaccagaaatagatacagta
ctaaaagctagaatcaatgacgtagctaggaatgaagttgaagccgcttatcttattaaa
gacaagcaacaacggtatcagcgattaggcgaattaagagagcaaactatttctgcttta
ttggctgaaaatgatgagttaaatgcagatgttattgccaatatgtttggtgagctagaa
cgttctatagtacgtaatcgtattcttgacggcgagcctcgcatcgatggtcgtgatcac
agaacagttaggcctatttctgttcgtaccaaattcttggaaagaactcatggttcctgt
ttgtttaccagaggagaaactcaagctattgttgttgccactttgggtaatgaacgtgat
gcacagatattagacggaattagtggcgaaagcagagatcgatttatgcttcattataat
tttcctccttattctgtcggtgaaacagggcaagtgggcagtcctaaacggcgtgaaatt
gggcatggccgtttagctaagcgtgctttaatggctgtactgcctgatgctaatgagttt
ccttatgtactacgtattgtatctgagattaccgaatccaatggctccagttctatggct
actgtctgtggaacaagtctggcattgatggatgccggggtacctttaaaagcaccagtc
gctggtgtggccatgggcttaatcaaggaaggtgatcgttatgctgtattaacagacata
ttgggtgatgaggatcatttgggtgatatggactttaaagtggccggtacggaaaaaggg
attactgctttgcagatggatatcaaaatttccgggattaccaatgaaattatggaacgg
gctctggagcaagcattggaaggtcgtacccatattcttggtgttatgaataatgctctt
gccgaacatagaaccgagttatctcagcacgctccaagaatcacaaccatgaaagtcgct
gaagataaaatccgcacaattattggcaaaggcggtgcaacaatcaaaggacttattgaa
agtaccggcgtatctatagatattgatgactcaggggttatccaattattttctccggat
aagattgctttggaagaggcgcaaaaacaaattaaagctttaattgctgaaattgaagta
ggtcagacttatcaagggaaagtaagcaagatagttgactttggagcctttatcaattta
ctgcctggtaaagatggcttactgcatatttcacaaatatgtgccgccagaacacaaaaa
gtagaagaggtattgcaggaaggtcaggaaattgaagtctttgttgctgggatagataag
caaggacgagtcaaactggagtggaaggataagccacaagctgaagccaaagaggtcgaa
gacgccccggtatctgctacgtttcttacaatggaagagcaatctgaagaaattaattca
ggcaacaaaatctctgaagaagaggaataa
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