Lactiplantibacillus pentosus: BB562_07795
Help
Entry
BB562_07795 CDS
T05251
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lpg
Lactiplantibacillus pentosus
Pathway
lpg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lpg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BB562_07795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpg03021
]
BB562_07795
Transcription machinery [BR:
lpg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BB562_07795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AUI78593
UniProt:
A0A241RTF0
LinkDB
All DBs
Position
1694333..1695439
Genome browser
AA seq
368 aa
AA seq
DB search
MAKAKATTEYDKAVKALIKDYKKSGSIQYDELSDKIAAPYKLDASGIDKLLQKVEDAGIS
VVDEKGDPDARAVKSVKTVSKKELSDAGSASGIKINDPVRMYLKEIGRVDLLTADEEVAL
ALRIEQGDESAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIG
AEMDMPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPADAAAYELLKEQL
EGVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KQLKDFLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaaaagcaacgacagaatacgacaaggctgttaaagcattaatcaaggac
tacaagaagtccggtagtattcagtatgatgaattatccgataaaatcgcagcgccttat
aagttagacgcgagcggaatcgacaaattattgcaaaaagttgaagatgctgggatcagt
gtcgttgacgaaaagggtgatccggatgcacgggcggtcaagagtgtgaagaccgtttcg
aagaaggaattgagtgatgcaggctctgcttctggtattaagatcaatgatccagttcgg
atgtatctcaaggaaatcggtcgggtcgacttgttgaccgccgatgaagaagttgcctta
gccttacgaatcgaacaaggtgacgaatcagccaagcaagaattagcggaagctaactta
cggttggtggtttcaattgctaagcggtatgttggtcgggggatgcaattcctcgatttg
attcaagaaggtaacatgggcttgatgaaggccgttgaaaagttcgattatcgcaaaggg
ttcaagttctcgacttatgccacttggtggattcgtcaagcgattacgcgggcaatcgct
gaccaagcgcggacgattcggattccagttcacatggttgaaacgatcaacaaattgatt
cggattcaacggcaacttctccaagacctcgggcgtgaaccaacgcctgaagaaattggg
gccgaaatggacatgccaactgaaaaggttcgtgaaatcttgaagattgcccaagaaccc
gtttcgttggaaaccccaattggtgaagaggatgattcacaccttggtgacttcattgaa
gaccaagatgcaacttcaccagcggatgctgcggcatacgaactcttgaaggaacaattg
gaaggcgtcctcgatacgttgactgaccgggaagaaaacgtcttacggttacggtttggt
cttgatgatggccggacccgcacgttggaagaagtcggtaaagtcttcggtgtgacccgt
gaacggattcgccaaatcgaagccaaagcattgcggaagttacgccacccatcacgtagc
aaacaattgaaagatttcttggaataa
DBGET
integrated database retrieval system
