Lactiplantibacillus pentosus: BB562_08075
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Entry
BB562_08075 CDS
T05251
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lpg
Lactiplantibacillus pentosus
Pathway
lpg03030
DNA replication
lpg03430
Mismatch repair
lpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB562_08075 (dnaE)
03430 Mismatch repair
BB562_08075 (dnaE)
03440 Homologous recombination
BB562_08075 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpg03032
]
BB562_08075 (dnaE)
03400 DNA repair and recombination proteins [BR:
lpg03400
]
BB562_08075 (dnaE)
Enzymes [BR:
lpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB562_08075 (dnaE)
DNA replication proteins [BR:
lpg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB562_08075 (dnaE)
DNA repair and recombination proteins [BR:
lpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB562_08075 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AUI78641
UniProt:
A0AAW8VZL2
LinkDB
All DBs
Position
1758732..1762082
Genome browser
AA seq
1116 aa
AA seq
DB search
MAQYIPLQVLSTFSLLQSTSTISELVQTAKQQGYPALALTDIDVMYGIVDFYNACRQAEI
APILGITLNLTGLQLTDQPFSLVVLAKDQAGYQNLMQLSTMKQTATTEALALTAVLPYLH
HLMVLTPAKNSEIATLLFQNAAQQAADWVTTVREQVDAGSLYLGVSLDQAPVLRTTMAEF
AQQQNLPIVALDPVNYVKTTDYFAVTVLQAIDRGQQIEKPETLQGLDGKDYLRPGARVVA
DYERLGLTAAVEATSQIAAQCQVELQFQAPQLPTFPTPDGQAANVYLRELCTAGLQQRLA
AMTADVDRQVYQERLERELKVIDQMGFDDYFLIVWDVMNYAHEADITTGPGRGSAAGSLV
AYVLKITDVDPLQYDLLFERFLNAKRANMPDIDLDIPDNRREQVLEYVHQKYGHDRVAQI
ITFGTLAAKQALRDVGRVFGLSTFEMSDWSAAIPNQLHITLQQAYQGSQRLQNLVADSSK
NRLLFETARRIEGLPRHYSTHAAGVVLSQKPLIEIVPLQAGGETMMMTQYTKDTVEAVGL
LKMDFLGLRNLSLMASALHYVQRQTGQPFAITKIDLNDPATLKLFQAGDTTGVFQFESAG
IRNVLRRLHPDNFELVAAVNALYRPGPMENIDRFIARKQGQEPVTYPAEQLAPILGPTYG
ILVYQEQVMQVAAVMGGFSLGEADLLRRAMSKKKRAVIDKMREQFIAGATQNGYSTDVAV
QVYQYIEQFANYGFNRSHAVAYSKMAFELAYLKVHYPGAFFTSLMNSVLGNGTKLKQYLA
EARQHQVGIVPPDINRSGQYFDWNGQAIVFGLSSIKGLRRDFIASVLDERKANGPFKNLQ
QFMQRIDDKWLKTDLMNALIYAGAFDRFGLNRAELLTSVPELMSSAELAGDSMSLFESLA
PKIKKQPELPLRERLEKEAATLGVYVSGHPVEAYDWLARQRHTQLVSTLTNEQPAQILVY
ITKVRTIRTKRGQPMAFATGSDLSGEINLTIFPNTFQRIQSELQPEAIALIGGKVEQQRD
LQVIVNTWQLADQVPKPAGQLFLRLQPDQADAGTQKEILTILSQFHGPNPVLIYSAAAHR
TVELNSQYWVAENPDLVAALTTLLGRDNVVMKNAIP
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatatattccgttgcaagtcctgagcacgttcagtttattgcaaagtaccagt
accatctccgaattagtgcagaccgctaagcagcagggctatccggcactagcgttgacc
gatatcgacgtgatgtacggaatcgttgacttttacaacgcttgtcgacaggcggaaatt
gcccccatcttgggcattaccttaaatctaaccggcctacaattgaccgaccagccgttt
agcttggtggttctagctaaggaccaggctggctatcagaacttgatgcaactctcgacc
atgaaacagactgccaccacggaggccctcgcgttgacggcagttttgccttatttacac
cacttaatggttttaacgccggctaagaacagcgaaatcgcaacgctcctgtttcaaaat
gcggcacagcaggcggctgattgggtgacgacggtgcgcgaacaagttgatgcgggcagt
ctttatttgggcgtctctttagatcaggcgccagttttacggacaacgatggctgaattt
gcccagcagcaaaacttgccgattgttgcgttggaccccgtcaattacgtaaaaacaact
gattattttgcagtgacagtgctccaagcgattgaccgtggccaacagattgaaaagcca
gagaccttgcaggggcttgacggtaaggattaccttcgaccaggcgcaagagtcgtagcc
gactatgaacgattgggcttaacagccgccgtggaagctaccagtcagattgctgcgcag
tgtcaggttgaattacagtttcaggcccctcaattaccgacgtttccaacgccagatggg
caagcagccaatgtttatttgcgtgaattatgtacggcaggattacagcaacggttagcg
gcgatgacagccgacgtggacaggcaagtgtatcaagagcgcctagaacgagaactgaaa
gtcattgatcagatggggtttgatgactactttctgatcgtgtgggacgtcatgaattat
gcccatgaggccgatattaccacaggtcctgggcggggttcggcggcagggtcgttagtg
gcctatgttttgaagatcacggatgtcgatcccttgcaatatgacctgttatttgaacgt
tttttgaatgccaaacgtgctaacatgcccgacattgacttggatattccggacaatcgt
cgtgagcaagtattggaatacgtgcatcagaaatacgggcacgaccgggtcgcacaaatt
attacgttcggaacgttagcggccaaacaagccttgcgtgatgtcggtcgggtcttcgga
ctgtcgacctttgaaatgagcgattggagcgcggcgattccgaaccagttgcacatcacg
ttgcagcaagcctaccagggctctcagcggttacaaaatctagtggctgattccagcaaa
aatcgcttgctctttgaaacggcgcggcgaatcgaaggactcccacggcattactcgacc
catgcggccggcgtcgtgctgagtcaaaagccactaattgagatcgtaccgttacaggcc
ggtggtgagaccatgatgatgactcagtatactaaggatacggttgaagcagtcggcctg
ttaaaaatggatttcttgggattacggaatttgtcattaatggcgagtgcgctacattat
gtacaacgtcagactgggcaaccgttcgcaatcaccaagattgacctgaacgaccccgcg
acgctcaaactgtttcaagcgggcgatacgaccggcgtgttccaatttgaatcggcggga
atccgcaacgtgctgcggcggttgcatcccgataacttcgagttagtggcagcggtcaat
gcattgtaccgtccggggccgatggaaaacatagaccggtttatcgctcgcaagcagggg
caagagccggtcacatatccagctgagcagctggcacccattctagggccgacttatggc
attttagtctaccaagaacaagtcatgcaggttgccgccgtgatggggggctttagccta
ggcgaagccgatttattgcggcgtgcaatgagtaagaaaaaacgggcggtcatcgataag
atgcgagaacagtttattgctggggcgacgcagaatggctattcaaccgacgtggccgtt
caggtctatcagtatatcgaacagtttgcaaattacggatttaaccggtcacacgcggtc
gcctatagcaaaatggcgttcgaattggcctacctgaaagtccattatccaggtgccttc
tttacgtccttgatgaactcagtcttgggtaacggtactaagctgaaacagtatctggcc
gaggctcgccaacaccaagtgggcattgtgccacccgatataaaccgcagtggtcagtat
tttgattggaacgggcaagccatcgtctttgggttgagttcaattaaaggcctgcgtcgt
gactttattgcgagcgtgctggatgagcgtaaagccaacgggccgttcaaaaatctacaa
cagttcatgcagcggatcgatgacaagtggcttaaaaccgatttaatgaacgctttgatc
tatgctggtgcttttgaccgattcggccttaatcgtgcggaattactgacgagtgtgccc
gaacttatgtcgagtgccgaattggccggtgatagcatgagcttatttgaatcattagca
ccaaaaatcaaaaagcaacctgaattgccgttacgtgagcgcttggagaaggaagcggcg
accctgggcgtctacgtttctggccatccagtcgaagcttacgactggctcgcacggcaa
cgtcatacccaattagtcagcacgctcacaaatgaacaaccggcacaaatattggtctat
attaccaaggtgcggacgattcgaactaagcggggtcaaccgatggcgtttgccactggc
agtgacctgtcaggcgaaatcaatttgacgatttttccgaatacttttcaacgcatccag
tcggaattgcagccagaagcgattgctttgattggcggaaaggtggagcaacagcgcgat
ttgcaagtgatcgtcaacacttggcaattagcggaccaggtaccaaaaccagccgggcaa
ctctttttacggttgcaaccagaccaggcggatgccgggactcagaaagaaattttaaca
atcttaagtcaatttcatgggcctaatccggttttgatctattccgcagctgcccaccga
acagttgaactaaattcacagtattgggtggctgaaaatccagatttggttgcagcgctt
acaacgttattaggtcgcgataatgtcgtcatgaagaacgctatcccttga
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