Lactiplantibacillus pentosus: BB562_09350
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Entry
BB562_09350 CDS
T05251
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lpg
Lactiplantibacillus pentosus
Pathway
lpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BB562_09350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpg03400
]
BB562_09350
Enzymes [BR:
lpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BB562_09350
DNA repair and recombination proteins [BR:
lpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BB562_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
PIF1
AAA_30
DAP3
nSTAND_NTPase5
AAA_19
DUF5839
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
AUI78872
LinkDB
All DBs
Position
complement(2042486..2044903)
Genome browser
AA seq
805 aa
AA seq
DB search
MAQIAQVLVDVPTMQTNRPYSYQIPAAWQSQVQPGMRVVVPFGRGKRRVQGFVLACDDVT
NFEGELKPIDAVVDLAPVLNTEGLAMTKWLAESTFSFQITCAQTMLPAVMRAKYEKQLRT
TATTPDEVRESLFGGQSMVPFDTVATTPAIVSQLLRLQAAGQVDVYYQVKNQARRKTQTA
LKARLSIPELEAEKANVRAGAKQQMAILQGLITLNGETMVQKAFCTRFKVNESAIRTAAQ
KGWLEKIAVEVYRDPYASHDIKATKALKLNDEQQVAVDQITAAVDQAATTTFLLEGVTGS
GKTEVYLQSMAAALAQGKTALMLVPEISLTPQMVQRVKGRFGKTVAVLHSGLSSGEKYDE
WRRIQRGEAQVVVGARSAVFAPLKNIGLIVMDEEHESTYKQDDAPRYHARQVALWRSQYH
HCPVVLGSATPSLETRARAEKGVYQRLLLADRVNRRPLPKVSIIDMKKEMQQHAESNFSA
PLLVALQDRLERHEQSVLMLNRRGYSSFVLCRDCGFVLKCPNCDISLTLHMDTHTMKCHY
CGHEEAIPRTCPNCHSRQIRYYGTGTEKVEEELQDLLPDATIIRMDNDTTRKKGAHEKLL
AKFGSGEADILIGTQMIAKGLDFPNVTLVGVLNADTALGLPDFRASERTFQLLTQVSGRA
GRAEKTGHVYIQTFNPDHYAIRFAQHHDYEGFFKYEMQMRHRGGYPPYYFTVQITASDLE
EAVAAKRMYQLLQWLRPRLAPSTILLGPTPKPIARVNRRYYYQIVIKYKQEPNLAKTLTT
LLHETQAQQRQGLQIGIDVEPLHFM
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaaattgcccaagttttagtcgatgtgcccactatgcagacaaatcgaccgtat
agttatcaaattccagctgcatggcaatcccaggtgcaacctggcatgcgcgtcgtcgtc
ccatttggtcgtggaaaacggcgggtccaaggcttcgtgttggcttgtgatgatgtcact
aattttgagggtgaacttaaaccaatcgatgcggtggtcgatttagcaccggtgctgaac
acagaaggcttagcaatgaccaagtggctcgctgagagcaccttttcatttcaaatcacc
tgtgctcagaccatgttaccagccgtcatgcgggctaaatatgagaaacaactgcgaaca
acagcgacgacgcctgacgaggttcgcgagtccttgtttggtggtcaatcaatggtcccg
tttgatacggttgccacgacaccggccattgtcagtcagctcttgcgactgcaagcagct
ggtcaggttgatgtttattaccaagtaaaaaatcaagcgcggcgtaagacccaaacggca
ctgaaagcgagattgtcgattccagaacttgaagctgagaaggccaacgttcgggcgggg
gctaagcaacaaatggccatcttacaaggcctaattacgctaaatggtgaaacgatggtg
caaaaagccttttgtacgcggtttaaggtcaatgagagtgccattcggaccgctgcacag
aaggggtggctcgaaaaaatcgcggtcgaagtttatcgcgatccctatgccagtcatgat
attaaggcaactaaggctttgaagttgaacgatgagcagcaggttgcggtcgatcagatt
actgcagccgttgatcaggccgcgacgactaccttcttattggagggtgtgacggggagc
ggaaagaccgaagtctacctgcaatcgatggcggccgccctggctcaggggaagaccgca
ttgatgctagtgcccgaaatctcattgacgccacagatggtccaacgcgtgaaggggcgg
ttcgggaagaccgtggcggtccttcacagtggcctttccagtggtgaaaaatatgatgag
tggcgtcggattcaacgcggtgaagcccaagtcgtagtcggtgctcgttcagcggtattt
gcaccgctgaaaaatatcgggttgatcgtcatggatgaggaacacgaaagtacttataaa
caggatgatgcaccgcggtatcatgcgcgccaagtggccttatggcggagtcaatatcat
cattgtccggtcgttctcgggtccgcaaccccttcattagagacgcgtgcacgggctgaa
aagggggtctaccagcgattgttgctagcagaccgggtcaatcgacggccgttgcctaaa
gtttccatcattgatatgaaaaaagagatgcagcaacatgccgagagtaatttttcggcc
ccgttacttgtcgcactgcaggatcggcttgaacgtcatgaacagagtgtgttgatgtta
aatcgacgcgggtactcctcgtttgtgctctgtcgtgattgtgggtttgtcttgaaatgc
cctaattgtgatatttcactgacgttacacatggatactcacactatgaagtgccattat
tgtggccatgaagaagcgattccgcggacgtgtcccaactgtcatagccgtcagattcgt
tattacgggacgggaacggaaaaagtcgaagaagaattgcaggacttgcttccagacgca
acgattattcggatggataatgacacgacgcgtaagaagggcgcccacgagaagttacta
gccaagtttggcagtggtgaagcggatatcttgattggaacccagatgattgccaagggc
cttgattttccaaacgtcacactggtcggggtcttgaatgctgatacggccctaggactg
cctgattttcgcgcgagtgaacggaccttccaacttttaacccaagtgagtgggcgggca
ggtcgggcggaaaagaccgggcacgtctatattcagacgtttaacccagaccactatgcg
attcgctttgcacaacatcatgactatgaaggctttttcaagtatgagatgcagatgcgg
catcgcggtggctatccaccgtactacttcaccgtccagatcacagcgagtgatttggag
gaagctgtcgcagccaaacggatgtaccaattattacagtggctacggccacgcttggcg
ccatccacgattttattaggtccgacgcccaaaccgattgcgcgtgtgaaccggcgctat
tattatcaaattgtgattaaatacaaacaggaacccaatctcgctaaaacgttgacaacg
ctgttacatgagactcaagcacaacagcggcaaggcctgcagattggaattgatgtagaa
ccgctgcattttatgtaa
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