Lactiplantibacillus pentosus: BB562_09835
Help
Entry
BB562_09835 CDS
T05251
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpg
Lactiplantibacillus pentosus
Pathway
lpg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BB562_09835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpg03400
]
BB562_09835
Enzymes [BR:
lpg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BB562_09835
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BB562_09835
DNA repair and recombination proteins [BR:
lpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BB562_09835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AUI78961
UniProt:
A0A2K9I1X6
LinkDB
All DBs
Position
complement(2142079..2142903)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETVRRGLNRLVKGATIADIDVYWPKIINNDVALFKERLINQTIQTIDRRGKYL
LFRFSNGLTMVSHLRMEGKYNVVPRGEARDKHTHVVFHLTDDRDLLYNDTRKFGRMTLVP
TGEELSVAGLRTIGPEPVADQLTLAYLTATLEHSKKMIKPLLLDQSKIAGIGNIYADETL
WMSKIHPMRPANSLTADEIATLRDNIITEMALAIKGHGTTVHSFSTAFGEAGQFQNHLHV
YGREGEPCERCGTMIEKIKVAQRGTHFCPLEQRL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaacggttcgtcgtggattgaatcggctcgttaagggt
gccacgatcgctgatattgacgtctattggcccaaaatcatcaataatgacgtggcctta
tttaaagaacgactgatcaatcagacgattcaaaccatcgaccggcgtggcaaatatttg
ttgttccggttcagtaatgggctgacgatggtgtcacacttgcgcatggaaggtaagtac
aacgtcgttccgcgtggtgaagcgcgcgacaagcatacgcacgtcgtctttcatttaacg
gacgaccgggacttgctgtataacgatacccgtaaatttgggcggatgacgttggtgccg
actggtgaggagctatcggtggctgggctacgcacgattggcccggagccggtcgctgac
caactgactttggcttatctgaccgcgacacttgaacattctaagaagatgatcaagccg
ctcttactggaccagagtaagattgcgggcatcggcaacatctacgcggatgaaacgttg
tggatgagcaagattcatccgatgcggccagccaattcgctgacagccgatgaaattgcc
acgttgcgcgacaatattattaccgaaatggcattagccatcaaaggacacggaacgacg
gtgcactcgttctcaacggcgtttggtgaggccggtcaatttcagaatcacttgcacgtc
tatggtcgtgaaggcgaaccttgcgagcggtgtggcacgatgattgagaagatcaaggtc
gcgcagcgtgggacacatttctgtccccttgaacaacgattgtag
DBGET
integrated database retrieval system
