Lactiplantibacillus pentosus: BB562_11615
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Entry
BB562_11615 CDS
T05251
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lpg
Lactiplantibacillus pentosus
Brite
KEGG Orthology (KO) [BR:
lpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpg03009
]
BB562_11615
Enzymes [BR:
lpg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BB562_11615
Ribosome biogenesis [BR:
lpg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BB562_11615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Methyltransf_25
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
PrmA
Methyltransf_11
RrnaAD
UPF0020
DOT1
Methyltransf_12
N6_N4_Mtase
Methyltransf_4
Methyltransf_32
DUF7642
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AUI79278
LinkDB
All DBs
Position
complement(2536548..2537924)
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AA seq
458 aa
AA seq
DB search
MKVNLPVHKGDVLDVTIMDLTYQGMGVAKVDNYPIFIENALPEEKITVKVTKTTKNFAFG
EVEKINQVSPHRVNPKGRVYRQTGIAPLQHLEYSEQLKFKQHQVAELFAKVHMDDVEVLP
TIGMDNPTQYRNKAQVPVRQVQGQLTTGFYKKNSHQLMPIEDYYIQDPEIDKAIVVVRDI
LRKYHKAAYDEFHHSGTIRTIMVRRGYYSHEMMVVIVTRTKHLPMADVVTQEIQAALPEV
VSVIQNVNSKKTNVILGPVNNVLAGKSTIDDQLLGLTFAISAQSFYQVNPQQTEKLYQLA
IDRAGLTGNETVIDAYSGIGTISLTMAQHAKQVYGVEIVPAAIDNARQNADKNGITNAKF
VLDSAEKAMAKWQADGIKPDVIVVDPPRKGLDADFIKSAGEMAPKRVVYISCNPSTLVRD
VQRFAEYGYQISAPVQPVDQFPQTPHIESVTVLERKEK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaatttaccagtgcataagggtgacgtgttagatgtcaccatcatggactta
acgtatcaaggcatgggagttgccaaagttgataactacccgatttttattgaaaatgcc
ttaccggaagaaaaaatcacggtcaaagtgacgaagacgacaaagaattttgcgttcggg
gaagttgaaaaaatcaaccaagtcagtccgcaccgggtcaatccaaagggccgcgtttat
cggcagactgggattgcaccattgcaacacctagaatatagtgaacagctgaaattcaaa
caacatcaggtcgccgaattattcgctaaagtgcacatggatgatgttgaagtcttgcca
acgattgggatggacaatccgacccagtatcggaataaggcgcaagtgcctgttcgccag
gttcaggggcaattaacgactggtttttacaagaagaacagtcatcaattaatgccaatt
gaagattattatattcaggatcctgaaattgataaggcaatcgtggtcgtacgcgacatt
ttgcggaagtatcacaaagcagcctatgacgaattccatcacagtggtacgattcggacg
attatggttcgtcggggctactacagccatgaaatgatggtcgtcatcgtcactcggacg
aagcatctaccaatggctgacgtggtcacacaagagattcaagccgccttaccagaagtg
gtcagtgtgattcaaaacgttaactccaagaagactaacgtgattttagggccagttaac
aacgtgttagcaggaaagtcgacaattgatgaccaattattaggattgacgtttgctatt
tcggcacaatcattctaccaggtcaatccacaacaaactgaaaaactgtatcaattagcg
attgaccgcgctggattgacgggtaatgaaacggtgattgatgcttattccggtatcgga
accatttcactaacgatggcgcaacatgctaagcaggtgtatggggtcgaaattgttccc
gctgcgattgataatgcccgccagaacgcggataagaatggtatcacgaatgccaagttt
gtgttggatagtgctgaaaaagcgatggctaagtggcaagcggatggtatcaagccagac
gtgatcgtcgttgatccaccacgcaagggtctggacgctgacttcatcaagagcgccggc
gaaatggcaccaaaacgggtcgtttacattagttgtaacccatcgaccttagttcgcgac
gttcaacggtttgcggaatacgggtaccagatcagtgcaccagttcaacctgtagaccag
ttcccacagacgccacatattgaatcggtgacggtgctggaacgtaaagaaaaatag
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