Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1): LPV_0333
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Entry
LPV_0333 CDS
T02174
Symbol
rhlE
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lph
Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1)
Pathway
lph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPV_0333 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lph03019
]
LPV_0333 (rhlE)
Enzymes [BR:
lph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPV_0333 (rhlE)
Messenger RNA biogenesis [BR:
lph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPV_0333 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
UTP25_NTPase-like
Exotox-A_bind
Flavi_DEAD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CCD07573
LinkDB
All DBs
Position
complement(346429..347673)
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AA seq
414 aa
AA seq
DB search
MSFKQLALIEPLNRAVSELGYTTPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFILPIL
QKASQQTQTSRNRVKVLILTPTRELAIQVHESIIQYGKYLTLRSAVIYGGVKSHSQIKQL
DSGLEILVATPGRLLDLYQQRAVKFDEINTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQ
NLLFSATFTPEVRALARNILNKAVEIDIAPRNTAVKTIKQTVYSVDRNHKLALLSHLLHK
NNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRTKALADFKSGKVQTLIAT
DIAARGIDIEKLACVVNFDLPNVPEDYVHRIGRTGRAGASGLAVSLVSTEEIKLLLSIEK
LINQKLERITIKDFEFLHNFSDLVSAKIQKFAPPKAGYKGNISRKSRTAFNKSA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaacaattagcgctgattgagccgctaaacagggcggttagtgagttaggc
tacactacccctaccagtattcaattaaaagccatcccgctcattttaaatgggcatgat
ttacttggttccgctcaaacaggaacaggaaaaacagcaagctttatattgcctatcttg
caaaaagccagtcagcaaactcaaaccagccgtaatcgagttaaagtactgattttaacg
cccacacgagaattagccatccaggtccacgagagcataatccaatatggcaaataccta
acactgcgctcggctgtgatttacggtggagtaaaaagccacagccaaattaaacaatta
gactcaggccttgagatactggttgcaacaccaggaagattattagatttatatcagcaa
cgtgctgttaaatttgatgagattaacaccctggtactcgatgaggcggatagaatgctg
gatatggggtttattcatgatataaaaaaaattatcaaattattacctttaaaaaggcag
aacctgcttttttcagcaacctttacccctgaagtgcgcgctttagccagaaatatactg
aataaagcggttgaaattgatatcgcaccgagaaataccgcggtaaaaaccataaaacaa
actgtttattcagtagatagaaaccataagttagcccttctgagtcatttacttcataag
aataactggggacaaactttggttttttctcgaaccaaacatggagccaataaactggtt
aagcaactggccgaatcccaaatatattcggttgctattcatggcaacaaatcacaggct
caacgaacaaaagccttggctgatttcaagtcaggcaaagtacaaacattaattgcaaca
gacatcgcagcacgcggcatagacatcgagaaacttgcctgtgtagtgaattttgacctg
cctaatgtgcctgaggactacgttcatcggattggacgaacaggacgggcaggcgcctct
ggattggctgtatccttggtcagcacagaagaaatcaagctgctgctgtctatagaaaaa
ttaatcaatcaaaaactggagcgcattacaattaaggattttgagtttttgcataacttt
tcagatttagtctcagccaaaattcaaaaatttgcgccgccaaaagcgggatataagggc
aatatcagcagaaaatccaggacggcttttaataagagcgcgtaa
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