KEGG   Lacticaseibacillus paracasei subsp. paracasei 8700 2: LBPG_00268
Entry
LBPG_00268        CDS       T02808                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lpi  Lacticaseibacillus paracasei subsp. paracasei 8700:2
Brite
KEGG Orthology (KO) [BR:lpi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lpi03016]
    LBPG_00268
Enzymes [BR:lpi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LBPG_00268
Transfer RNA biogenesis [BR:lpi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LBPG_00268
 Prokaryotic type
    LBPG_00268
SSDB
Motif
Pfam: TruB_N TruB_C_2 TMP_3
Other DBs
NCBI-ProteinID: EEQ64819
UniProt: A0A826HVV5
LinkDB
Position
complement(1563166..1564071)
AA seq 301 aa
MNGILPLYKPTGMTSADAVYHARKILGIKKIGHSGTLDPNVDGVLPLAIGAGTKAVPQLM
ASGKVYTGEITLGFATTTEDLDGEVVDKTPLTQPFTADQLDAALTAWTGNITQIPPMFSA
VKVNGRRLYEYARAGETVKRPERQATVSQFTRTDEPVFSATDGTQRFRFEVHVSKGTYIR
TLAVDVGKTLGVAAVMSQLTRVKSGGFTLKQAVSIEQLKAHAAAGTLADVIQPIDIAFAD
LPQVDLTVEQFEAISHGRFLSLDQQTPRVRLHFAGVLKAIYRREDDQYRPDLMFLANEKN
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaacgggattttgccgttatataaacccactggcatgaccagtgctgatgcggtgtat
catgcccgcaagattcttggtatcaaaaaaattggccattccggcacccttgatcctaat
gtggacggcgtgctgccgctggcgattggtgcaggcactaaagcggtgccgcaattaatg
gccagtgggaaagtctacaccggagaaatcacgttaggttttgcgacgacaaccgaggat
ttggatggggaagttgttgataaaacgcctttaacgcagccgtttacagctgatcagttg
gatgctgcattgactgcgtggacaggaaacatcacacagattccgccgatgttttcggcg
gtcaaagtcaatggtcgccggctttacgaatatgcgcgcgccggtgaaactgtgaagcgg
ccagaacgacaggccacggtgtcacagtttacacgtaccgatgaaccggttttttcagcc
actgatggcacccagcggtttcggtttgaggtccatgtttctaagggaacctatattcga
acactggcagtggatgttggcaaaacgctgggagttgctgcagtgatgagtcaattgacg
cgagtaaaaagcggcgggtttacgttgaagcaggcggttagcattgagcaattgaaggct
catgccgcggcaggtactttagccgatgtgattcaaccgattgatattgcttttgccgat
ctgcctcaagttgatttgaccgtagaacaatttgaggcaatcagtcatggccgcttttta
tcgctcgatcagcagactccgcgcgttcgtctgcattttgcaggcgttcttaaggctatc
tatcgccgagaagacgatcagtatcggccagatttaatgtttttagctaatgaaaagaat
gtgtga

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