Lacticaseibacillus paracasei subsp. paracasei 8700 2: LBPG_00986
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Entry
LBPG_00986 CDS
T02808
Name
(GenBank) DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpi
Lacticaseibacillus paracasei subsp. paracasei 8700:2
Pathway
lpi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBPG_00986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpi03400
]
LBPG_00986
Enzymes [BR:
lpi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LBPG_00986
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LBPG_00986
DNA repair and recombination proteins [BR:
lpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBPG_00986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
BapA_N
GGDEF_2
Auto_anti-p27
RNHCP
Motif
Other DBs
NCBI-ProteinID:
EEQ65537
UniProt:
A0A826HPK7
LinkDB
All DBs
Position
complement(1737901..1738749)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL
LMRLSNGETIISHLRMEGRYYVVKDANTPFDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
KTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVAGVGNIYADEV
LWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTYVDAEGNRGSFQNALH
VYDREGTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHQRRRPA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtggaaacagttcgccgctcgcttctgccgttagtcaaaaat
aaagtcattaccgccatcaacactaactgggagaaaatcctgatcaatgggttggcgact
tttcaaaaggaaattgtcggcagtgagatcacgaccattgatcggcgcggcaagtatctt
ttgatgcgcctcagcaatggtgaaacgatcatcagccatctgcgtatggaagggcgttac
tatgttgtcaaagatgcaaacacaccttttgataagcacgatcacgttacgttcactttt
caggatggcagtcagttgcgctatcgggatctgcgaaagtttgggcggatgcggctgatc
aaaaccgggcaggaggatcaggtcacagcacttgctaaacttgggccggaaccaacccca
agcacctttgacgaagcggactttgcccagcgcttgaaacgtcatcataaaccgattaag
tcggttttactcgatcaaaccgtggtcgctggtgtgggcaatatttacgctgatgaggta
ctttggttaagtcggctcaatccgctgcagccagctgataccttgaaatctaaagaaatc
aaaacactgcatgacgcgattatccaagaattaaacgcagccattgcggcaggcggcacc
agcgcgcatacgtatgttgatgcagaaggcaatcgcggttcttttcaaaatgccttgcac
gtctatgatcgggaaggtaccccgtgcgatcgctgcggcacgacgattgtcaaaattaag
gttggtcagcgcggaacccattactgcccacactgtcagccattacatcaaaggaggcgg
ccagcgtga
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