Lytechinus pictus (painted urchin): 129253737
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Entry
129253737 CDS
T09066
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129253737
03015 mRNA surveillance pathway
129253737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129253737
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129253737
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129253737
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
IMPa_N_2
Motif
Other DBs
NCBI-GeneID:
129253737
NCBI-ProteinID:
XP_054748136
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All DBs
Position
2:2546985..2559201
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AA seq
368 aa
AA seq
DB search
MGFNAPSKIQETALPLLMADPPKNMIAQSQSGTGKTAAFVLTMLSRVDNNQYPQALCLAP
TYELARQIGKVVEEMGKHLPEVGVRYAVRGQKVARGEKVTQQIIIGTPGTTLDWCLKFRS
IDLSRMKVFCLDEADVMIATQGHQDQSIRIQKKLPSSCQMMLFSATYDNTVMKFATTVVP
DPVVIRLRREEESLSNIKQYYVLCSNKEEKAESLSNIYGTITIGQAMIFCQTKRNANWLA
ERMTQEGHAVALLSGELTVEQRVAVLERYRAGKEKILITTNVMARGIDIEQVTVVVNFDL
PVDVNGQADCETYLHRIGRTGRFGKSGLAINFVDGRRSMEIMNYIQEHFGRKIERLYTDD
AEEIEKIV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggggttcaatgctccttccaagattcaggaaacggcactccctcttcttatggctgat
ccgccgaagaacatgatagcacaatctcagagtggtaccggaaaaacagcagcctttgta
ttaactatgctcagtagagtcgataacaaccaatacccacaggccctttgtttagcaccc
acctatgaactagccagacaaataggaaaggtcgtcgaagagatggggaaacatcttccc
gaggttggtgttaggtatgcagtcagaggacaaaaagttgcacggggagagaaggtcaca
caacagatcatcataggaacacccggtacgaccctcgactggtgtttgaagttcagaagc
atagacctatcaaggatgaaggtgttctgtctcgatgaagccgatgtgatgattgcgacg
caaggacaccaagaccaaagtatccgcatccagaagaaacttccaagctcgtgccaaatg
atgctgttctccgccacctacgacaacaccgtcatgaagtttgcaacgacggtggtgccg
gatcccgtggtcatacggctgcgtcgggaggaagagagtctctccaacatcaaacagtac
tatgtcctgtgttcaaacaaggaagagaaagccgaatccttgtcaaacatctatggcaca
atcactatcggtcaggcgatgatcttctgccagacgaaacgaaatgccaactggctcgca
gagaggatgacacaagaaggacatgcggtggcgctgttgagtggtgagctgacggtggaa
cagcgagtagcggttcttgagcggtatagagctgggaaagagaagatcttaatcacgact
aacgtcatggctagaggtatcgatatcgagcaggtcaccgttgtggtgaactttgacctt
ccagtcgacgttaatggacaagccgactgtgagacctatttgcatcgaatcggacgaact
ggacgctttggcaagtcgggtctagcgatcaacttcgtagatggacgtaggagtatggag
atcatgaactatatccaggaacattttggtcgaaagattgagaggttatacacagacgac
gcagaagagattgagaagatagtttga
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