Lytechinus pictus (painted urchin): 129253766
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Entry
129253766 CDS
T09066
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129253766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129253766
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
129253766
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
129253766
NCBI-ProteinID:
XP_054748166
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Position
2:4453181..4463815
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AA seq
227 aa
AA seq
DB search
MASTPRDRNSAGWPRGRSVSDSNNVKTSAAVHRDRTAILYPLTNYTFGTKEPLYEKDSSV
PARFQRMRDEFHKMGTRRSVEGVLIVHEHDLPHVLLLQLGTTFFKLPGGELKAGEDEMDG
LKRLMTEILGRQDGVQQDWMVEDVIANWYRPNFEPPQYPYIPAHITKPKEHKRLYFVQLA
EKALFAVPRNYKLVAAPLFELYDNSPGYGPVISSLPQLLSRFNFIYQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaccccgcgtgatcgaaattctgctggctggcccaggggaagatctgtttca
gactcaaacaatgtcaaaacttcagctgcagtgcatcgtgataggacagcaattttatat
cctcttacaaactacacatttggaacaaaggagcctttatatgagaaagattcaagtgta
ccagcgaggttccaaaggatgagagatgaatttcacaagatgggcacaagacggtcggtt
gaaggagtccttatcgttcatgagcatgatctcccccatgttttattgctgcagctaggg
acaacatttttcaaattgcctggtggagaactcaaagctggggaagatgaaatggatggt
cttaagagacttatgacagagattcttgggagacaagatggtgttcagcaagactggatg
gtagaagatgtaattgcaaactggtacagacccaactttgaaccccctcagtacccttac
attccagctcatataaccaagccaaaggaacataaaagactctactttgttcaacttgca
gagaaggccctgtttgccgtcccaaggaattacaagctagtagcagcccctctctttgaa
ctctacgacaattcaccgggatatggtcctgtcatatccagcttaccgcagttacttagc
agattcaacttcatttaccaatag
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