Lytechinus pictus (painted urchin): 129253802
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Entry
129253802 CDS
T09066
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129253802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129253802
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129253802
mRNA degradation factors
5'-3' decay
Decapping complex
129253802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_Vps41
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
EIF3I
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
129253802
NCBI-ProteinID:
XP_054748204
LinkDB
All DBs
Position
2:7049123..7086875
Genome browser
AA seq
1399 aa
AA seq
DB search
MEPGPTSGNQLNRLLSGGDASQILKNMLNVGKPNQSNNGGVGSGSGASPQNVSDLSSQAN
RGDPAVMNAMPSQSAKNLLPDATPLADIMSTDKKVQQSIVLEGDDRGGSVPIYGCEVDIT
PSLASCVDSPIPGSNKVKITPVVNYEWEAKYYFGNLVAVNNTFLVYVLRIQSGYGLRILN
RRSTVRALLKGFSCIIVDIAFAFHNADILGCVDQRGNLSVWHIKEEGGKITYEPKIQVKR
SLPPSDYHRIVWCPYLPDDLSDEELPNEWSNLLAVSHGEKAELWDISVVASELGTDEILY
EQVSNGLIRINGHTKAITDMAVSPDGSVLASASMDGTVRFWQMYWEVSEDPPRCLHQFAP
HDGEPVMSLLFCDNHKQQDASLPFWRFLITGAERNRELKVWCTVQWTCLQKIRFGSSPND
IQPCLKVKLDLSASFLMATDIRRKVLYVIQLYQEHEEGRAHFSSVTEFLLMQPMLSFAIV
DAGRCRAKQTQEEVEDGEELQPGEFEEVSPGEDGDRVDKGQAVSVLVKMFCVFSRALQEL
QIRFQPTPSVKQDILAGSINTTTSHGDNTLLDGLSDVSFSATERSLGSTDTEQPRLDTAS
LPSPHRDPQTPSAETSSFTSESTHSSSQPYLMTPESLMNSSRSPTKTTTPQNLLRDSTTS
SSSSFTHITGTNVSVDDLLSSCGTSEMNTLAATPDSSVTLTPTPTASNHVSPLVGKPSPV
GSGHMPKTYEQIKEDEDEGPKSPPPSPVGGDIQDLQGDQLLESSENVAELLKKSARIKEK
RISDSSAEVAQILGTNVEEEEAEDEELEDDVIEQEGNDEEEEDNGQSSPVTMDKGKMDVD
DGKEENQGVVAQETNTPDEMNTEGIVQSSRTDDDDDGSQASAAHGEVRDERGSTQLLGEP
VVQQSLQNHALRSDDNVHQSEYSQPQHSIDQGKYQQDIGQIMNNLEQMMLLLQTQQQEIK
HLRQEMNKAQLSNSIIQSTKARIDKLEKGLGTKLDTIFTKQSEQERQRLSLALQEKTNLD
KQKQERLLETVTQTLKQQVTSRLDKTVRTEIEAKVVPELTRVLVPVTEQLNTSIGQKLTA
TDQLMKENIQKLVKSKGVADTMGQAAANTLSTTIQTTYREAFHSTVVPAFERACSSMFEQ
INTSFDAGTREYVNQLEANLAKTKQKQREGQEPIMKELKSMVETQRTSMDELKASIFQNV
QGEISEQLHTSTEKLKRDVLDRVQVIVQEEIGTALKAHQATLQQDMMAAIRSQAATPIPQ
AQDIQHIQAKIKQLIEQKLINAAFQHALNASDLRVVVFTCNEVTPDTIFTDNGCLLEQPV
LLSLIQQLSQDLGSQTKIKCTYIDEALLAVDTTFPVTREHLSGIITELCRQITMVLQTQP
NHPQTKQLKRVLMQAQSLK
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggagccaggcccgactagtgggaatcagctaaacaggctacttagcggtggagatgcc
tcacaaattttaaagaacatgttgaatgttggaaaaccaaatcagtcgaacaacgggggt
gttggatctggatccggagcatcgccacaaaatgtgtcggatttgtcatctcaagccaac
agaggtgaccctgctgtcatgaatgccatgcccagtcagtctgccaagaacttactacct
gatgctacaccactagcagacatcatgtcaacggataagaaagtccaacagagcattgtc
ctagaaggtgatgatcgtggagggtcagttcctatatatggatgtgaggttgacataaca
cccagcttagcatcgtgtgttgatagccctatcccaggtagcaataaggtaaagattaca
cctgttgtgaactatgaatgggaggccaaatactactttggaaacctagtagccgtcaac
aataccttccttgtctatgtgctgagaatacaatctggttatggcctgaggattctcaac
agacgcagcacagtcagggcgctgttgaaaggattttcttgcatcatcgttgacattgct
tttgcgtttcacaacgccgacattctaggctgtgttgaccagcgtggaaatctctctgtt
tggcacatcaaggaagaaggcggtaaaataacctacgaaccaaagatccaggtaaaacgt
agcttaccgccaagtgactaccatcgtatcgtttggtgcccttaccttccagatgattta
tctgacgaggagcttcctaatgagtggagcaatctccttgcagtctcacacggtgaaaag
gctgagctctgggacatttcagtagttgctagtgagctaggcaccgatgaaatcttgtat
gagcaggtttctaatggactgatcagaatcaacggccatacaaaggcaatcaccgacatg
gcagtgtctcccgacgggtcagtcttggccagtgccagtatggatggcaccgtcagattc
tggcagatgtattgggaggtgtccgaggacccaccaagatgccttcatcagtttgctccc
catgatggcgaaccggtcatgtctctactattctgtgataatcacaagcaacaagatgca
agcttgccattctggcggttcctcatcaccggtgcagaacggaaccgagagctgaaggtt
tggtgcaccgtccagtggacctgtttacagaagatccgctttggatcctccccaaacgat
atccagccgtgtctcaaggtcaagcttgatctcagcgccagcttcctcatggctactgac
atcaggaggaaggttttgtacgtaattcagttgtaccaagaacatgaagaaggccgagct
catttcagttcggtaacagaatttttgttgatgcaaccgatgctaagctttgccatagtt
gatgctggacgatgccgggccaagcaaacacaagaggaggttgaagatggcgaggagctc
caaccaggtgaatttgaggaagtatcccctggagaggatggtgatagggtggacaaaggt
caagcagttagtgtcctggtcaagatgttctgtgtcttttcaagggcattacaagaacta
cagattcgtttccagccgacaccctctgtgaagcaagatatattggctggctctattaat
acaacaacatcacatggagataatacattactggatggactctctgacgtgagcttcagt
gccacagaacgctctttgggatccactgataccgaacaacctcgcctggacacagcatca
ttaccttcaccccacagagatcctcaaacaccctccgcagagacaagttctttcacctcc
gagtctactcactcttctagccagccatacctcatgacaccagaatccctcatgaacagc
tcccgctcacccaccaagactaccacgccccagaacctgctccgagacagcaccaccagc
tcaagtagcagtttcacccacatcacgggcaccaatgtctctgtggatgatctgttgagc
tcctgcgggacttctgaaatgaacactcttgctgccacgcctgacagctctgtgacgctc
actccgacgccaactgcttcaaatcatgtatctcccctggtgggaaagccatcgcctgtt
ggaagtggccacatgccaaagacatatgaacagatcaaagaggatgaggatgagggacca
aagtcaccacccccatcacctgtaggaggtgacatccaggatcttcagggtgaccagtta
ctggagtcgtcggaaaacgtcgctgagctgctgaagaagagtgccaggatcaaggagaaa
cgcatctcggactcgagcgcagaagtggctcagatccttggtacaaacgttgaagaggaa
gaggcagaggatgaggaattagaggatgatgtgattgaacaagaggggaatgatgaagaa
gaagaagataatggacaaagttcacctgttaccatggataaagggaaaatggatgttgat
gatggtaaagaggagaaccaaggtgttgtggcacaagaaacaaatacaccagatgaaatg
aatactgaaggaattgttcagtcttcaagaactgatgatgatgatgatgggtcacaagcc
tcagcagctcacggtgaggtgagagacgagaggggtagcacccagttacttggagaacct
gttgttcaacaaagtctgcaaaatcatgctttaagaagtgatgataatgtccatcagagt
gaatacagtcaaccacaacacagcattgatcaagggaaataccaacaggatattggacag
atcatgaataacttagagcagatgatgttactgcttcagacccagcagcaggagatcaag
catctaagacaggaaatgaacaaagctcagctgagtaacagtatcatacaatctaccaag
gctaggatagacaaacttgagaaggggttgggcaccaagcttgataccattttcaccaag
caatcagaacaagaacgccaaagactcagccttgctctgcaggagaagaccaatcttgat
aagcagaagcaggaacgtctcctagagacagtcacccagaccctcaagcaacaggtcacc
agtagactcgacaagacagtccgtacagagattgaggccaaggtcgtaccagagctaact
agagtacttgttccggtcactgaacagctgaatacgagtataggccagaaactgactgct
actgaccagctcatgaaggagaatattcaaaaacttgtcaagtcaaagggcgttgcagat
accatgggacaggctgcagcgaacaccctttcaaccaccattcagaccacctaccgagaa
gctttccacagtactgtcgttcctgcctttgagagggcgtgttcatccatgtttgaacag
attaataccagttttgatgcaggcacaagagaatatgtgaatcagcttgaagcaaatctg
gccaagacgaagcagaaacagagggagggacaggagcccatcatgaaggaactgaaatca
atggttgaaacacaaaggacaagcatggatgaactcaaagcatccatcttccagaatgta
cagggagagatctctgaacagctgcatacaagcacagaaaagttaaagagagacgtgctg
gacagggttcaggtgatcgtccaggaggagatcggaacggcgctcaaggctcatcaggca
accctccagcaggatatgatggctgccatcaggtcgcaggcagccacacccataccgcag
gcacaggacatacagcacatacaggccaagattaaacagttgatagaacagaagcttatc
aatgcagctttccaacatgctctgaacgcatcagaccttcgagtggtggtgttcacgtgt
aacgaagtgacccctgacactatcttcactgacaacggatgtctgctggagcagcctgtg
cttctttctctcatccaacagctttctcaggacttgggatcacagaccaagatcaagtgc
acatacattgatgaggcattgcttgccgtagacaccaccttcccagtaacaagagaacat
ctatctggtatcatcacggaactctgtcgtcagatcaccatggtcctacagacacaacca
aaccatccccagactaagcagctcaagagggtcctcatgcaggcccagtccctcaaatag
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integrated database retrieval system
