Lytechinus pictus (painted urchin): 129254119
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Entry
129254119 CDS
T09066
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129254119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129254119
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129254119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
ANAPC3
TPR_2
TPR_12
ARM_TT21
ANAPC8
Motif
Other DBs
NCBI-GeneID:
129254119
NCBI-ProteinID:
XP_054748547
LinkDB
All DBs
Position
2:27999239..28021278
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AA seq
777 aa
AA seq
DB search
MAEKDSREQKDVGSKRDESPSPLQIPAITGEEKDVSTAAHSHFEAGNYNGCVEQVRKLAN
MRPTDPKVQHNLAVALFYQSGCRKVDEYRRSLGNVCSQVHVDLEQIESLEDADQAIFFFN
NAVLLHHLRQHHQAIRVLEKLFQVIEPLEEWLAVRILLLLIESYLITHQPDKALATLVYL
EKLMQTSEAKKEAAEKGKDSSKDEEHRPVDTEKVKAKIHQFKTKCYLQLKHLKFCKREIK
SVKTVMNSNGASPITLFLKANFEFERQNNRKAIKLLNSSPEGLDYNQMGQCIPVMYYNNL
VAIHYAMLKYHLGAHYARRALQENASAIKELPKKSGRTIQTLGMNHHHELLYNTGIVLLH
AGRPLAAFDCLVEAVQVFPTNPRLWLRLAECCIAANKTAGEGETKGGSKQGIIHSTVGTG
SHRKFILSPGGLDTNYGSDIQPAAMPVASLEFASLCLSNALSLLPEKPGSLPTTPVSSQN
SVGSEASDTASKQTGPASVPAPPGPSLKPTEVSSLRCSVMAATAYVSLSLGDDVTALENA
RTLMAQPKISGSQQFLARMYAAEALLKHDQIGEAIQLLNPESVCDVSVLITPTPDFGENK
DRDRNEKSNNHEGGSGGGGGGNNNAGDPNEGAEPRKVIHQYYPASIQVARAHMFFNLATT
HVFRSEWDKTRRCLQQGCSMVPVHDIPKQALYTAIYLELHTGNYSMALQMVKKQQMIPYI
KITPVPFIEPINKPPPASSSTPSSFPAPIGPPTTSRPSGFGLPTPIGGGKPSANTWR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaagatagtcgtgaacagaaagatgtaggaagcaagcgagacgagtcccca
tctcccctccaaatacctgctattacaggagaagagaaggatgtatccactgctgcccat
agtcactttgaggcaggaaactataatggctgtgtggaacaggtccgtaaactggccaac
atgcgtcccacggatcctaaggtgcagcataaccttgcagttgcgctcttctaccagtcg
ggttgtaggaaggtggatgagtacagacgtagcctgggcaacgtttgcagccaggttcat
gtggatcttgaacagattgaatccttggaggatgctgatcaggccatcttcttcttcaac
aatgctgtgctactccatcatctccgacagcatcaccaagctatccgtgtcttggagaaa
ctcttccaggtcattgagccactggaagagtggttggctgtgcgtatcttgctccttctg
attgagagctaccttattactcatcagcctgacaaggccctggcaaccctggtctacctt
gagaaattaatgcagaccagtgaggcaaagaaagaggctgcagaaaaggggaaagacagc
agcaaagatgaggagcatagacctgtcgatactgagaaagtaaaggccaaaatacatcag
ttcaaaacaaagtgctatcttcaactgaaacatctcaagttctgtaagagggaaatcaag
tctgtcaagacggtcatgaactcaaatggagcatcccccatcacgctcttcctgaaggct
aactttgagtttgagcggcagaacaaccgcaaggccatcaagctcctgaacagctctccc
gagggtctggactataaccagatgggccagtgcatccctgtcatgtactacaacaacctc
gtcgctatccactatgccatgcttaagtaccacctgggtgcccactacgccaggagagcc
ttgcaggagaatgcctcggccatcaaggagctaccgaagaagtctggtcgtacaatccag
actcttggtatgaatcaccatcatgaactcctctacaacacgggcatcgttcttctacat
gcagggcgccctctggcagcctttgactgtctggtggaagccgtccaggtcttccctacc
aacccaaggctctggttacgactggccgagtgctgcatcgctgccaacaagacggcggga
gaaggagagacgaagggtggcagcaagcagggtattatccacagtaccgtgggaacggga
tcgcatcgcaagttcatcctgtctcccgggggactggacaccaactatgggtctgatatc
cagccagcagccatgcctgtagcttccctagagtttgcttctctgtgcctgagtaacgcc
ctttcccttctgccggagaaaccgggaagtctaccgaccacgcctgtctcgtcacagaac
agtgtcggtagtgaggcatctgacaccgcaagtaagcagaccggccctgcctccgtcccg
gccccgcccggcccgtctcttaaacccaccgaggtttccagtctacgctgttcggtgatg
gctgccactgcctacgtcagtctgtcgcttggtgatgatgtcacggcactggagaatgcc
aggacattgatggctcaacccaagatctctggctcacaacaattcctggcccgtatgtat
gctgctgaggctctgctgaagcatgatcagataggagaggcaatccaattgttgaaccct
gagagtgtatgtgatgtatctgttctgatcacacccaccccagactttggggagaacaag
gatcgagaccggaacgagaagagcaataaccacgaaggtggaagtggtggaggaggaggg
ggtaataacaacgcaggtgaccctaacgagggggcggaacctcgtaaggtcatccatcag
tactacccagcgtctatccaggttgccagggctcacatgttctttaacctggctaccaca
catgtgttcaggagcgagtgggacaagacacggaggtgtcttcaacagggttgtagcatg
gtaccagtccatgacattcccaagcaagccctctatactgctatctacctggagttacat
actggaaactactctatggcccttcagatggtcaagaagcagcagatgatcccgtacatc
aagatcacacctgttcctttcattgaaccgatcaataaacctccaccagcttccagcagc
accccatcaagcttccccgcccccatagggccacccactacctcccggccctcggggttc
ggtctccccaccccgataggtgggggcaaacccagtgccaacacttggagatga
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