Lytechinus pictus (painted urchin): 129254248
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Entry
129254248 CDS
T09066
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129254248
04121 Ubiquitin system [BR:
lpic04121
]
129254248
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129254248
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129254248
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129254248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
TEN_NHL
zf-C3HC4
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4_2
zf-C3HC4_4
Vgb_lyase
zf-RING_5
CRLF3_N
zf-B_box_Trim66
HVO_A0556
DUF5711
zf-C3HC4_3
zf-RING_2
EPO_TPO
Beta-prop_IFT122_1st
CENP-Q
CCDC22_CC
T7SS_signal
CCDC18_1st
DUF7919
Aida_N
Motif
Other DBs
NCBI-GeneID:
129254248
NCBI-ProteinID:
XP_054748679
LinkDB
All DBs
Position
2:complement(39114387..39124010)
Genome browser
AA seq
777 aa
AA seq
DB search
MATPHEVDEFHDSQQWCPLCSERITDPKILQCLHSFCRPCLEKRVAEPDRVKCPVCMHET
SLGDMGLDGLTSSILINNILDVVSSHDDEMDQRLFPPSHHQRRQCKSCEEGQIATRLCKD
CNEVLCESCVLAHQRVRLTKDHTIIYLEGINGSRHAPKLPLLFHHYQQQHQYHPPKMQPV
SDRPPSYCSTHKEMLRLYCDTCYKAICRECTMVEHNGHDVVYLQDAVQDSKALTVKMLND
AKANSRALQESLAHTQAMAEKVEHKCQSVASEVRANIRRHKMGLEERERELLRKVEVIRQ
VKCKSLHSQADDIQQAMESLNECMESVQKALESGTDVDVLKTKEKIMSEMRTLKSLRGYL
QPQEEDGIFFTPPDGVLHTAILSMGYISSSAYPPNCYATGDGLKRALVGKISSFMVHSKD
HNNEPRCVGGEILEVTVRGPDGILYPAEVIDQQNGTYLASYRPMLEGQHYLSVTIKGKNI
MDSPFVVTARNARKFTTIGPALMSFGSEGEGDGQLCRPWGIAVDAEGRIIVADRSNNRIQ
IFNVDGSFSHKFGSPGTRNGQFDRPAGVAVSGEGNIIIADKDNHRCQVFTISGQFLFKFG
EKGSKNGQFNYPWDVAVNSEGKILVSDTRNHRIQQFNPDGTFINKFGFEGALWKHFDSPR
GVSYNNEGHIVTTDFNNHRLVVIHSDFQSAQYLGSEGTNNGQFLRPQGVAVDQEGYIIVA
DSRNHRIQVFHPNGSFLCKFGMPGTGSGQLDRPSGICVSPDGVILVVDFGNNRVQAF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggccaccccgcatgaagtcgacgaatttcacgattcacaacagtggtgccctctctgt
tctgaacgcataacagaccctaaaatattacaatgtttgcacagtttttgtcgaccatgt
ttggagaaacgtgtcgctgagcccgatcgtgtgaagtgccccgtttgtatgcatgaaaca
tcactaggtgacatgggactagatggcctgacctcaagcattctcatcaataacatcctt
gatgttgtcagtagccatgatgatgaaatggatcaacgtttattcccccccagtcaccat
cagaggcgacagtgtaaatcatgcgaggaagggcagattgccacacgcctttgcaaagat
tgcaatgaagtcctctgtgaaagctgtgtcctggctcatcaaagggttcgtcttaccaag
gatcacacaattatctacctggaaggcatcaatggaagtcgccatgcacctaaactccct
ttgctctttcaccactaccagcagcagcatcagtatcacccgccaaagatgcagcctgtt
tctgatagaccgcctagctattgtagcactcacaaggagatgttgcggctttactgcgac
acctgttacaaagccatctgtagagaatgcaccatggtggagcataatggtcatgatgta
gtttacctgcaagatgctgtccaggatagcaaagcattgactgtcaagatgctgaatgat
gccaaagccaactcaagagctcttcaagaaagtttggcacacacgcaagccatggcagag
aaggtagagcataagtgccagtcagtagcttcagaggttcgtgctaacatccgcaggcac
aaaatgggattggaagaaagagagagggagcttttacgcaaagttgaagtaatccgtcaa
gtgaaatgcaaatcacttcattcccaggctgatgatattcaacaagctatggagagtttg
aatgagtgtatggaatctgtgcagaaagctcttgagtcaggcaccgatgttgatgttcta
aaaaccaaagaaaagatcatgtctgagatgagaacactgaaaagtttgcgaggatacctt
caaccacaggaggaagatggcatcttcttcacacctcctgatggtgttttacatactgcc
atcttatccatgggatacattagtagcagtgcttatcctcctaactgctatgcgacaggt
gatggattaaaacgggctctggttggcaagatatcctccttcatggttcattcaaaagat
cacaataatgaaccaagatgtgttggtggagagattttagaggttactgtccgtggtcct
gatggcattctttatccagcggaggtcatcgaccagcagaatggcacttatctagcaagc
tacagaccaatgcttgaaggtcagcattacttgtcagtcacaattaagggcaagaatatc
atggatagcccatttgttgtcactgctcgcaatgcacgtaaattcaccaccatcggtcca
gccctcatgtcttttggtagtgaaggggaaggcgatggtcagctctgtcgtccctgggga
attgcagttgatgccgagggaagaattattgttgcagacagaagtaacaaccgtatccag
atcttcaatgtagatggctccttcagtcacaagtttggctctcctggaacccgcaatggg
caatttgatcggccagcaggagttgctgtcagtggtgaaggcaacatcataattgctgat
aaggataaccatcggtgccaggtcttcactatatcaggccaatttctcttcaagtttggt
gagaaaggtagtaagaatggccagttcaactacccttgggatgtagcagtcaacagtgag
ggtaaaatcttggtatctgataccaggaaccataggatccagcagtttaacccagatggt
actttcatcaacaagtttgggtttgaaggtgctctgtggaagcactttgattcacccaga
ggtgtatcctacaacaatgaagggcacattgttacaacagatttcaacaatcatcgtctt
gtggtcatccattcagacttccagtcagcccagtaccttggatctgagggaaccaacaat
gggcagttcttacgacctcaaggagtggctgttgaccaggaaggttacatcattgtggca
gattcacgaaatcaccgcatccaagtattccatccaaatggtagttttctgtgtaagttt
ggtatgccaggcacaggatctggtcagttagatcgcccatctggtatctgcgtgtctcca
gatggtgtgatattagtggtagatttcggcaacaaccgagtgcaagcattctga
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