Lytechinus pictus (painted urchin): 129254260
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Entry
129254260 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129254260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129254260
03036 Chromosome and associated proteins [BR:
lpic03036
]
129254260
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129254260
Coactivators
SAGA/TFTC/STAGA complex
129254260
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
129254260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF1254
Motif
Other DBs
NCBI-GeneID:
129254260
NCBI-ProteinID:
XP_054748691
LinkDB
All DBs
Position
2:39813135..39827855
Genome browser
AA seq
983 aa
AA seq
DB search
MAGAKSIEDIFSSEVDEKEVSALVGSLVTKLAPQNPKAASGPSQDATVTRNHVNDNSSVH
AQTGPGGLTTLKQAEPGISIHANATRQTMQDSHLGTTGAPTTKGLNHENAPGNIHANDNA
TQGNGQNNHGIGSTSIADIVKRDSQPPAISNMMTKPPTATTVSVSQQSPAIVAQITGAGL
QKPNEPPISRPLSGNTMGQNRTSVGNDQQIVKVVSVPSMPSGSAVQNTNSSKNEHGATAN
MNSISISNQNVSSVSAGSAKEQLLVRQQTLPSNDQSGAMKPRIVVQPSIAATIQQATSGV
ATISGIPSGNMTLGNANQKVVTINVANPATQTGGRPGQYVVNTVPGSKAVSPQIITQTVR
MPTGHHVIAPRAQLGGQVQIRLPPGTTLPPGVVLINKGGTVQAVMANPAGIQAHVAGAPG
MTTYRHVQPGIVTSTAQPGRVLTSVGGSNVVSSPQVTTTRSGSPVVIASGTPTTAMRGAT
AANASSQQTSSLPKATGKGQGSSSSNSGAQLSSSAMDNVKKCRNFLTTLIKLASNANQPP
ETVQNVKMLVQNLIDAKIEPEEFTLKLQKELNSSPQPYLVPFLKRSLPLLRQTLQRGSSG
SNISTFLFFYCLKPAINKTXPAAVKSIXFQLMQRVKXKSQQASQKHLSSKNSKASSPGRS
PSPQTKPGVSKSSKSSSQSSSKSSRSSGSKSSSSKSSGGKATPRKDKSKDTSASFSRDDD
DINDVASMAGVNLSEESARILATNEAFVGTQLRSCEDERFLHKTPLQHGMSKICSKHGIS
DATPAVLDVVSLAVQERLKQVVEKLSVISQHRLEIYRVIDARFEPMNDVHQEXFFFEHVI
LLSLXRKRRDEQEREILLRAAKSRSKQEDPEQLRLKQKAKEMQQMELEQLRQQEANLTAL
AAIGPRKKRKLDSETSSSSPGGASGSSSSSLLSTLNSTSSNTTPFLRTQFRRTKRVNMKD
LLYLMEQEPETKRSHLLYKMYLK
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgcgaagtccattgaagatatattttcttctgaggttgacgaaaaggaggta
tctgcgttggttggatctctcgttacaaaattagccccacagaatcccaaggctgcgtct
ggaccatcacaagatgccacagtgacaaggaatcatgtcaacgataactcttccgtacat
gcacaaactggacctggcgggctaacaacgttaaaacaagcggagccggggatttcaata
cacgcgaatgcgacaagacaaaccatgcaggattcccatttgggcaccacgggcgcacca
acgacgaagggtctcaatcacgagaatgcgcctggcaatatccatgcaaatgacaatgca
actcaagggaatggtcaaaataatcatggaataggatcaacatctatcgctgatattgtg
aaacgagactcacagccaccggcaatttcaaacatgatgacgaagccgccaacggctacg
accgtttcggtgagccaacagtcacctgcgattgtggcacagatcaccggagcgggcctt
caaaaaccaaatgaaccgccgatcagcagaccactttctgggaatacaatgggtcaaaat
agaacttcggttggcaatgaccaacaaattgttaaagttgtttcagtgcctagcatgcca
agtggcagtgctgtgcaaaatacaaactcttcaaaaaatgaacatggtgcaactgcaaat
atgaattctatttctatttctaatcaaaatgtaagctcagtctcagctgggtctgccaaa
gagcagcttctcgttaggcaacagacattaccaagtaatgatcaatcaggtgcaatgaaa
ccaaggattgttgttcagccaagcatagcagcaacaattcagcaagcaacttctggagtc
gctacaatatctggtattccatcaggcaacatgacactgggcaatgccaatcagaaagtt
gtgacaattaatgttgccaatccagccacccaaacaggaggcagaccagggcaatatgtg
gtaaatactgttccaggcagtaaagctgtatcgcctcagattataacacagacagtacgg
atgcccactgggcatcatgtgattgctcctagagcacagcttggtggacaggttcagata
cgtctgcctccaggcaccaccttgccacctggagttgtattaatcaataaaggaggaaca
gtacaagctgtcatggcaaatccagctggcattcaagctcacgtagcaggagctcctgga
atgacaacataccggcatgtccagccaggaatagtcacctctacagctcagccagggagg
gtccttacatcagttggtgggagtaatgttgtcagcagtcctcaagttacaaccactcgg
tcaggttcacctgtagtcattgcctctggaacaccgacaacagcaatgagaggagctaca
gctgcgaatgcatcttcacaacaaacctcatcattaccaaaggccacaggcaagggtcag
ggtagctcttcatccaactctggggctcagctctcaagttcagccatggataatgtgaag
aaatgtagaaactttctgacaactttgatcaagctagcttccaatgcaaatcaaccacca
gagactgttcaaaatgtcaagatgctggttcagaacctcattgatgctaaaatcgagcca
gaggagtttactctcaaacttcagaaggagctcaactcttcaccacaaccataccttgtg
cctttccttaagaggagtttacccctattaagacaaacgttacagcgagggagttcagga
tctaacatctcaacctttttgtttttttattgtttgaagcctgccatcaacaaaacttaa
cctgctgcagttaaaagcatctaattccagctgatgcaaagggtgaaataaaagtcacag
caagcttctcagaagcatttgtccagtaagaactccaaggccagttctcctggtcgctcc
ccaagccctcaaaccaaaccaggcgttagcaagtcatccaaatcttcatcgcagtcatcg
agcaaatcatcacggtcatcaggaagtaaaagtagttctagcaaatcttctggaggaaaa
gctacgccgaggaaagacaagagcaaagatacatctgctagctttagtcgagatgatgat
gacatcaatgatgtagcatcaatggctggagtgaatctgtcagaggagagtgcccgtatt
cttgccaccaatgaagcctttgtaggcactcagctcaggtcttgtgaagatgagagattt
ctccataaaacgccattacaacatggcatgagcaaaatatgttcgaagcatgggatttca
gatgctacaccagctgtattagatgtggtttcactggcagttcaagagagattaaaacaa
gttgttgaaaagctgagtgttatatcacaacatagattagaaatatatagggtaattgat
gcaagatttgaaccaatgaatgatgttcatcaggaataatttttctttgagcacgtcatc
ttactttctttgtaaagaaagagaagagatgaacaagaaagagaaatacttcttagagca
gccaagagccggtcaaagcaagaggaccctgagcagttgagattgaagcagaaagcaaaa
gaaatgcaacaaatggaattagagcagctgagacaacaggaagctaatcttacagcattg
gcagctattggtccaaggaagaagaggaaactagattcagaaacctctagttcatctccg
ggtggtgccagtggatcatcatcatcatcattattaagtaccttgaactctacaagctcc
aacacaactccattccttagaacacagtttcgtcgcacgaagcgagtaaacatgaaggat
ttactctacctaatggagcaagaaccagaaaccaaaaggtcacacctcctctacaagatg
tacctcaagtga
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