Lytechinus pictus (painted urchin): 129254295
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Entry
129254295 CDS
T09066
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129254295
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129254295
Spliceosome [BR:
lpic03041
]
Complex C
Other components
Complex C specific factors
129254295
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
nSTAND3
Cas3-like_C_2
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
129254295
NCBI-ProteinID:
XP_054748721
LinkDB
All DBs
Position
2:complement(42351868..42371637)
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AA seq
700 aa
AA seq
DB search
MAAPVPKFWKPGTAAPGEGLKEERSGGGSGEGETQCVVFNQYVSLSIEQQRQRLPVFKHR
NHILYLLEKYQTLVVVGETGSGKSTQIPQYLVEAGWGAEGHVIGVTQPRRVAAVTVAQRV
AEERGAIIGHEVGYAIRFEDCTDPQSTKIKFMTDGYLLREMMRDPLLKRYSVLMLDEAHE
RTLFTDIIVGLLKKIQKKRPELRIIIASATLDAEAFRDFFNKNTSNDKREDTATILTVEG
RTYPVDIFYSTSPVPDYLKAMVETIMKIHKSEPTGDILAFLPGQDEVENVLRMVIDQIRG
LRDSSMKMMALPMYGSLPAKDQMRVFERVGKNTRKVVIATNIAETSITINGIVYVIDGGF
LRIKAFNAKNGVEGLVTVPVSQASAQQRAGRAGRVRSGKAYRLYTEEDFKKLPKTTVPEM
QRSNLGTAILQLKCLGIDNVLRFPFLSPPSSKAMVRGLELLYALGGLTDHAKLSEPLGVR
MAELPVNPMLAKMLLVSGEFGCSEEILTVAAMLQVNNVFQCPANQRNAAERAKRKFGVKE
GDHLTLLNVHEAFLKYKKNSRWCRENFLNYKALCRVVVVREQLKKLLKKFKVKMVSSEGD
ADTVLRCIVAGFFPNVAHYHPSGEYRTIRDDFPLHIHPSSVLYTQPPPTWVVYNEVLQTS
KDYMRDVTAVESSWLYELAPHFYQFGTDNEIASKRQKTER
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcccgttcccaagttttggaaaccaggaactgctgctcccggggaaggcttg
aaagaggagagatctggcggtgggagtggggagggagagactcagtgtgttgtattcaac
cagtatgtatctctctcaatagaacaacagagacagagactaccagtatttaagcatcgg
aaccatatcctgtacctgctagagaagtaccaaaccctggtcgttgtaggtgagacagga
agcgggaagagcacccagattccgcagtatcttgtagaagcaggttggggagcagaaggc
catgtcataggggtcactcaacccaggagagttgctgctgttacagtagcccagagagtt
gcagaagagagaggagccatcattggccatgaggttgggtatgccattcgctttgaagat
tgtaccgatccacagtctaccaagatcaagtttatgacagatgggtacttgctgagagaa
atgatgagagatcccctcttaaagagatacagtgtgttgatgcttgacgaagcccatgag
agaacccttttcacagacatcattgtcgggctgctgaagaagatccagaagaagagacct
gaactacgaatcatcattgcctcagctaccctcgatgcagaagcgttcagggacttcttt
aataagaataccagcaatgacaagagggaggatactgcaactattctcaccgtcgaagga
agaacttatccggttgacatattctactccacaagtcctgtaccagactacctgaaggcc
atggttgagaccatcatgaagattcataaatcagaaccaactggtgacatccttgctttc
cttccgggtcaggacgaggttgagaatgtccttagaatggttatagatcaaatccgagga
ctacgagacagctccatgaagatgatggcgctgcctatgtatggcagtctcccggccaag
gatcagatgagagtctttgaacgtgttggaaaaaacaccaggaaggtcgtcatagcaacc
aacatcgcagagacatccatcactattaatgggattgtgtatgttattgatggtggtttt
cttaggatcaaggctttcaatgccaagaatggtgtagagggtcttgtcaccgtccctgtg
tctcaggcgtcggcccaacagagggctggcagggctgggcgtgtcagatcagggaaggcc
tatagactctacacggaagaagacttcaagaaactacccaagacaaccgtgccagaaatg
caaaggagcaaccttggtacagccatcctccagttgaagtgtcttgggatcgacaacgtc
ctgcgcttccctttcctctcgcctccatcctccaaggctatggtgagagggttggagctg
ctctatgccctgggtggtctcaccgaccatgccaagctgtccgaacccctgggggtcagg
atggccgaactaccggtcaatcccatgttagccaagatgctccttgtatcgggggagttt
ggttgctcagaagagatactcactgttgctgcaatgctgcaagtcaataatgtattccag
tgtcctgccaaccaaaggaatgcagctgaaagagctaagagaaaatttggagtgaaggaa
ggagatcacctgacattattgaatgtccatgaagcattcctgaagtacaagaagaactca
agatggtgtcgagaaaacttcttgaattacaaagccctctgtagagtggttgtggtcagg
gaacaactcaagaaactcctcaagaagttcaaggtcaagatggtctccagcgagggcgac
gcagatacagtactccgctgcatcgtagctggctttttccccaacgtcgctcactaccac
cccagcggggagtacaggacaatacgagatgactttcctcttcacatccatccatcttct
gttctgtacactcaacctcctccaacgtgggtggtatataacgaggttctccagaccagt
aaagactacatgcgagatgtaacagcggtagaatcatcgtggctgtatgagttagctccc
cacttctaccaatttggaacagacaatgagatagcttccaaacgccagaagacagagagg
tga
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