Lytechinus pictus (painted urchin): 129254341
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Entry
129254341 CDS
T09066
Name
(RefSeq) slit homolog 2 protein-like
KO
K05401
toll-like receptor 3
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129254341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lpic04054
]
129254341
04090 CD molecules [BR:
lpic04090
]
129254341
Pattern recognition receptors [BR:
lpic04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
129254341
CD molecules [BR:
lpic04090
]
Proteins
129254341
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
Motif
Other DBs
NCBI-GeneID:
129254341
NCBI-ProteinID:
XP_054748774
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Position
2:complement(45186565..45189228)
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AA seq
887 aa
AA seq
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MASSSIMYSIFLCLLVNLTVQYASGQEKHLPTRSSTVHEDEKSHVCDQIIKLKKASCRSK
DLDIVPQNLSQDIEILDLGWNNITRLLNVSFEIYPLISDLDISSNNLRFIEPAVFYPLKG
LTYLDLAFNPWLLLPGTGVFMMSSQLSILDLAESNLKSLPNDTLKWTSHLSYVDMSFNQL
SFVNISSCGVADLVTLSNNQIQHLTERYFTFVCLSITLNLKANPIQTVDPDVIASLHVSS
LELGSYPLSNEVLTNITLGISKSNITKLSIVRGSVDVFPTCLYLPLRDSSLAVLDLSRNN
LNNLHPLVFSNLTKLVELRISENNLPIREIQPDFFKGMDDLKVMEIPANQIRQINPYNQS
WSIYISELYLASNLITEISGFSFRGLGNLTTLDMSSNEYLSVFELTDFSGLGNIQRITLT
GSRISVLELHTPTLKSLSMNSVAPLLVLRPGKSFKHLQSLVNLNMRDSGRAQSDLWNVTT
NTSLFNRLLNLGHLDLSRNIFLSVGELPPGIFHPLSTLKELSLDYCSITILHPLVFSGLE
SLQKLSLKGNNIQSLHVVLSFLELIESINFDNNRITNLEDVTFHNNGKLKSLFLANNRLT
SLNRSTFKPLVSSVTSLDLSKNLINCNCDLKWLIDWIKFNEHVHLLNKDATMCSMASLVS
LRQKNLLDFDPDKLCGINIGLISCISLAVLASIIITLLVCRNRWQLKYRIFLLKLAVLGY
KEMQDARDHNDYEFDINIIFFDGDEEWIREHLRPALELHLPRYQRNVFGDEDLVLGMHYL
DSVDYVVTHSYKTIIVLSRAAVKDHWFILKFRTAMDHVSDTLTEFVLVVFLEDIPDDEMP
FLVRLYLSDGRPYIHWTEDLRGQEFFWNELSTNLTVNLRTNDLIPNE
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcagttccatcatgtattccatctttctttgtcttctggtcaatttgaccgtt
caatatgccagtggacaggaaaaacatttaccgacgagatcatcaacagttcacgaggac
gaaaaaagtcatgtttgcgaccagatcataaaactgaaaaaagcttcttgtaggagcaaa
gacctggacatagttcctcaaaatctttctcaggatatcgagattcttgatttaggatgg
aataatatcaccaggctcttgaatgtctcgtttgaaatataccctcttatcagtgacttg
gacatttcttctaacaatctaagattcatagaacccgctgtattttaccctctcaagggg
ttaacctacctggatctagctttcaacccttggcttttgcttccaggaacaggagttttc
atgatgtcttcacagctttccatcctagatctagcggaatcaaacttgaaatcacttcca
aatgacactctaaaatggacttcccatctgtcttatgtagatatgtcattcaaccagttg
tcctttgtaaacataagttcttgtggagtagcagatttggtcaccctgagtaataatcaa
atacaacacctgacagagagatatttcaccttcgtgtgtctttcgatcactttaaatcta
aaggcaaatccaatccaaactgttgaccctgatgttatcgcatctttacatgttagctct
ttggaactaggtagttaccctttaagtaacgaagtattaacgaacattacccttgggatc
tccaaatcaaacattacaaaactgtcaattgtaaggggatctgttgatgtgtttccgaca
tgcttataccttccactgcgtgattcctcgcttgctgttcttgacttaagcagaaataac
cttaataaccttcatcctttagtcttctcgaacttgacaaaactcgttgaattgaggatt
tctgaaaacaatcttcctatacgtgaaattcaaccagatttcttcaagggcatggatgat
ttgaaggtaatggaaataccagcaaaccaaatacgtcaaataaatccctacaatcagagt
tggtcaatatacatatcagagctttacctagccagtaatctcattacagaaatatcggga
ttttcatttcgtggtttggggaatttaaccaccctagacatgagttcaaacgaatatctt
tcagtcttcgaactgacagatttttctggacttggaaatatccaaagaatcacactaacc
ggaagccgtatcagcgttctagaactgcacactccaacacttaaatcactttccatgaac
tctgttgctcccctgttagtcctgcggccagggaaatcctttaaacatttgcaatccctt
gttaacttaaacatgagagattctgggagggcccagtctgacctttggaatgtaacgacg
aacacgtcacttttcaacagattattgaatcttggacatttggatttgagtaggaacata
tttttgtcagttggggaactaccacccgggatcttccatccgctctctactttaaaagag
ctaagcctggactactgctccatcacaatcctacatcctctcgtcttttcaggattagag
tcgcttcagaagttgagtttaaaaggaaacaacattcagagtcttcatgttgtactctcg
ttcttggaactgatagaaagtatcaacttcgacaataatcgtatcacgaatttggaggac
gtaacattccataataacggaaaactgaaaagtctttttttggctaataacagactaaca
agtctcaaccgaagcacttttaagccgttagtttcatctgttacatcacttgatctatcg
aaaaacttgataaattgtaactgtgatctgaagtggctaatcgattggatcaaatttaat
gaacacgtgcatttgttaaacaaggacgcaaccatgtgttcgatggcctctcttgtgtct
cttcgtcagaaaaatctgctcgactttgacccagataagctttgtggaattaacattggc
ctgatttcgtgtatttccttggcagtccttgcttccattattatcaccctcttggtttgt
cgcaacagatggcagttgaagtacagaatctttcttttaaaattggctgtacttggatac
aaagaaatgcaagatgctcgagaccacaatgactacgagtttgacattaacatcatcttc
ttcgatggcgacgaagaatggattcgcgaacatctccgacctgctcttgaattacacctt
cctcggtaccagagaaacgtctttggtgacgaagacctcgtcctaggcatgcattacttg
gattccgttgattacgtagtgacccatagttacaagaccatcatcgtgctaagcagagct
gctgtgaaagaccactggttcatactcaagttccgtacggccatggaccacgtgagtgat
acgctcacggaattcgtgttggtggtttttctagaggacatcccagatgatgaaatgccc
ttcttagtgagattgtatctcagtgacggtagaccttatattcactggactgaagacttg
aggggacaagaatttttctggaacgaattgtcaacaaatctgactgtcaatttgaggacg
aatgatctgatcccaaatgagtaa
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