Lytechinus pictus (painted urchin): 129254356
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Entry
129254356 CDS
T09066
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129254356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129254356
Spliceosome [BR:
lpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129254356
Complex C
U5 SnRNP specific factors
129254356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
129254356
NCBI-ProteinID:
XP_054748792
LinkDB
All DBs
Position
2:complement(46098083..46133218)
Genome browser
AA seq
2353 aa
AA seq
DB search
MAGAPPGFILGMHPMAYAQPQQVMQQQPPQQPVKQVQQQVPSYMSEEKLQEKARKWQQLQ
SKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLK
LMENMPMPWEQIRDVSVLYHITGAISFVNEVPRVIEPCFIAQWGSMWIMMRREKRDRRHF
KRMRFPPFDDEEPPLDYADNVLDVEPLEPIQMDLDPEEDSPVYEWFYDHKPLIDSKMVNG
TSYKSWNLTLPVMSTLYRLANQLLTDLVDDNYFYLFDLKSFFTSKALNMAIPGGPKFEPL
VRDANLQDEDWNEFNDVNKIIIRQQIRTEYKIAFPYLYNNLPYYVHLTWYHTPTVVFIKT
EDPDLPAFYFDPLINPISHRHAVKNAEPLPDDDEEFELPDYVQPFLQERPLYTDNTANGI
ALLWAPRPFNLRSGRHRRAMDIPLVKTWYREHCPSGQPVKVRVSYQKLLKIYVLNALKHK
PPKSQKKRYLFRSFKATKFFQSTSLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNF
NLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSHVQYRLGNVDAFQLADGIQYIF
AHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGPVGKGPGCGIWAAGWRVWVFFMR
GVTPLLERWLGNLLSRQFEGRHSKGVTKTVTKQRVESHYDLELRASVMHDIIDMMPEGIK
QNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRFVKSKADWWTNTAHYNRERIR
RGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRF
SPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIK
RHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKP
ADTEPPPLLVYKWCQGINNLQDVWDMSEGECNVMMESRYEKLYEKIDLTLLNRLLRLIVD
HNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQFYGLVLDLLALGLHRASEMA
GPPQMPNDFLQFQDVVTETNHPIRLYSRYIDKVHIFFRFTAEEARDLIQRYLTEHPDPNN
ENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDMKNRLPRSITTFLWEQSFVSVYSKDN
PNLLFNMSGFECRILPKCRTTSDEFTHKDGIWNLQNEVTKERTAQCFLRVDDESLQRFHN
RVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIG
LNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDED
QLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTL
FQKDRHTLAYDKGWRVRTDFKQFQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVE
GILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTI
NRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELD
ALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNVSRPSLLADTKDTMDSTTTQKYWI
DVQLRWGDYDSHDVERYGRAKYLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAFGNWFPGC
KPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDD
TNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTA
EEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKF
GDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRTKVILKPDKTTIT
EPHHIWPTLTDEEWIKVEVALKDLILNDYGKKNNVNVASLTQSEIRDIILGMEISAPSQQ
RQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETSTFSSKTEWRVRAISATN
LHLRTNHIYVSSDDIKETGYTYILPKNVLKKFIIISDLRAQIAGYLYGVSPQDNPQVKEI
RCIVMVPQWGTHQTVHLPNQLPDHEFLKEMEPLGWIHTQPNELPQLSPQDVTTHAKIMAD
NPMWDGEKTVIITSSFTPGSCSLTAYKLTPSGYDWGRQNTDKGNNPKGYMPSHYERVQML
LSDRFLGFFMVPAQGSWNFNFMGVRHDPNMRFDLHLANPKEFYHEVHRPSHFLNFSSLED
VDNMNSDREDLYK
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagcacccccaggattcatactggggatgcaccccatggcctacgcccagccc
caacaggtcatgcaacaacaaccgccgcagcagccggtcaaacaggtgcaacaacaggta
cccagttacatgtcagaggagaagctccaagaaaaggctcgcaagtggcagcagcttcaa
tctaaacggtatgctgagaagcgcaagtttggtttcgtggatgctcagaaggaggacatg
ccaccggaacatgtgaggaaaatcattcgtgatcatggtgacatgaccaacagaaagttc
cgtcatgacaaaagagtctatctcggagccctgaaatacatgccccatgctgtcctgaaa
ctgatggagaacatgcccatgccgtgggagcagatccgagatgtgtccgtcctttaccat
atcactggggctatctcattcgtcaatgaagtccccagggtgattgagccatgcttcata
gcacaatggggttccatgtggatcatgatgaggagggagaagcgtgatcgacgtcacttc
aagaggatgcgtttcccgcccttcgacgatgaggagcctcccttggactatgctgacaac
gttcttgatgtggaacccctggaaccaatccagatggacctggacccagaagaagactcc
ccggtctatgagtggttctatgatcacaagccacttattgactccaagatggtcaacggc
accagctacaaatcatggaatctgaccttgcctgtgatgtcgacactctatcgtctggcc
aaccaactcctcactgatctggtagatgacaattacttctatctgtttgatctgaagtcc
ttcttcacttccaaggctctcaatatggccatccctggtggacccaagtttgaacctctg
gtcagggatgcaaaccttcaggatgaggattggaacgagttcaatgatgtcaacaagatc
atcatccggcagcagatcaggaccgagtacaagatagccttcccttacctctacaacaat
ctaccctactatgttcatctgacatggtaccatacaccaacagttgtcttcatcaagaca
gaagatcctgatctacctgccttctactttgatcctctcatcaaccctatttcccacaga
catgctgtcaagaacgcagagcctcttccggacgatgacgaggagtttgagctgccagac
tacgtccagccattcctacaggagcgtcccctgtacacagacaatacagccaatggcatt
gccttactgtgggccccacgacctttcaacctgaggtcaggaagacacaggagagccatg
gacataccccttgtcaagacatggtatcgtgagcattgtcccagcggtcagcccgtcaag
gtgcgtgtctcttaccagaaactcctcaagatctatgtcctcaatgctctcaagcacaaa
ccaccaaagtcacagaaaaagaggtacctgttccgatcgttcaaagccaccaagttcttc
cagtcgacgagccttgactgggtagaggttggtcttcaggtgtgtcgtcaggggtacaac
atgctcaatctcctcatccatagaaagaacctcaactaccttcatcttgactacaacttc
aacctgaagcctgtcaaaacactcacaaccaaggaacgtaaaaagtctcgttttggaaat
gctttccatctctgtcgtgaaatccttcgccttaccaaacttgttgtagacagtcacgtg
cagtacagactgggcaacgtagatgctttccagttggcggatggaattcagtacatcttt
gcccatgttggtcagcttactgggatgtaccgctacaagtataagctgatgagacagatc
aggatgtgtaaagatctcaaacatgtcatctactacagattcaatacaggaccagtgggt
aaagggccaggatgcggtatctgggcggctggctggcgtgtctgggtgttcttcatgcgc
ggggtaacccctctgctggagcgctggttaggcaacctcctctccaggcagtttgaaggc
cgtcattccaagggtgtcaccaagaccgtcaccaaacagagggtggagagtcactacgat
ctggagcttcgtgcatcagtgatgcatgacattattgatatgatgcctgaaggtataaag
cagaacaaagcaaggactatcctgcagcatctgagtgaagcatggagatgctggaaggct
aatatcccttggaaggtaccaggccttcccacccccattgagaacatgatcctgaggttt
gtgaagtccaaggcagactggtggacaaacacggctcactacaaccgcgagagaatccga
cgtggggctacagtagataagaccgtgtgcaagaagaacctaggaaggctcaccaggctc
tatctcaaagcagagcaggaaaggcagcataactatctgaaggatggtccatacatcact
gccgaggaggccgtcgccatttacaccaccactgtccactggctcgagagccgtcgcttc
tcacccatccccttccctccactctcctacaaacatgacaccaaactactcatcctggct
ctggagagattgaaggaggcatacagtgtgaaaagtcgtctgaaccaatctcagagagag
gaactcggtctcatagaacaggcctatgacaaccctcatgaagccctcagtagaatcaag
cgtcatctgctcactcagcgtgctttcaaggaggttggtatagaattcatggatctgtac
agtcatctcatccccgtctacgatgtagaacccttagagaagatcaccgatgcctacctt
gatcagtatctatggtatgaagccgataagagacgtctcttccctccttggatcaagccg
gctgatactgaacctcctcctctcctagtctacaagtggtgtcaaggcatcaacaatcta
caggatgtgtgggacatgtcagaaggagagtgtaacgtgatgatggaatcccgctacgag
aagctctacgagaagatagatctgactctactcaacaggttactgcgtctcatcgtagac
cacaacatcgctgattacatgacggccaagaacaatgtggtcatcaactacaaggacatg
aatcacaccaattcctatggtatcatccgagggctccagtttgcatccttcattgtgcag
ttctacggtctggtcctggacctgttagcactcggtctacacagagccagtgagatggct
ggaccaccgcagatgcccaatgacttcttacaattccaggatgttgtgacagagactaac
catcccatccggctgtattcacgctacatcgataaagtccatatcttctttaggtttaca
gccgaggaagcgcgagatctgatccaacgctacctgacagagcatccggaccctaacaat
gaaaacattgtgggttataacaacaagaaatgctggccaagggatgcaaggatgagactt
atgaaacatgatgtcaatctgggacgtgctgtcttctgggacatgaagaatcgtcttcct
cgctccatcaccaccttcctgtgggagcagagctttgtctctgtttacagcaaggataac
cctaacctgctcttcaacatgagtggatttgagtgtcgcatcctaccaaagtgccgtacc
acgagtgatgagttcacccacaaggatggcatctggaacctacagaatgaagtaactaag
gaacgcacagcccagtgtttcctgcgtgtagatgatgaatcgttgcagaggttccacaac
agagtcagacagatcctcatggcttcaggttcaactacattcactaagatcgtgaacaaa
tggaacacggccctgattggtctgatgacctacttcagagaggcagtggtcaacacccag
gaactcctggaccttctggtcaagtgtgagaacaagatccagacccgtatcaagatcggt
ctgaactccaagatgcccagcagattcccaccggtggtcttctacacacccaaggagttg
ggagggctggggatgttgtccatggggcatgtcctcattccgcagtcagatctcaggtgg
tccaagcagacagatgttggcatcactcactttaggtcaggtatgagccatgatgaagat
cagctcattcccaatctctaccgctacatccaaccatgggagagtgagttcatagattca
cagcgtgtgtgggccgagtatgccctcaaaagacaggaagctaatgctcaaaatagacgt
ttgaccctggaggatttggaggattcctgggatcgcggaatccctcgcatcaataccctc
ttccagaaggacagacacacactagcctatgacaagggctggagagttaggacagacttc
aaacagttccaggtcctgaagcagaatccattctggtggacgcatcagcgccacgatggt
aaactatggaacctgaataattacaggacagacatgatccaggctctaggaggggtagaa
ggtattcttgagcacaccctcttcaagggaacctacttcccaacatgggaaggtctcttc
tgggagaaggctagtggctttgaagaatctatgaagtacaagaagctgaccaatgcacag
agatccggtttgaaccagatccctaacagaaggttcactctctggtggtcacctaccatt
aacagggctaatgtgtatgtgggtttccaggtacagcttgatctgaccggtatcttcatg
cacggcaagattccaaccctcaagatctcactcatccagatcttcagggctcacttgtgg
cagaagatccatgaaagtgtggtcatggacctgtgtcaggtgtttgatcaagagcttgat
gccctagagattgagactgtccagaaggaaaccatccatcccaggaagtcctacaagatg
aacagctcctgcgctgatatccttctctttgctgcttacaagtggaatgtctccagaccc
tccctcctagctgacaccaaggataccatggacagtaccacgacacagaagtactggatc
gatgtccaactgagatggggtgactacgattcccatgatgtggaacgttatggtagagca
aagtacctggactacaccacagacaacatgagtatctacccatcacccactgggcttctc
attgcaatagaccttgcctataatctgcatagtgcatttggtaactggttcccgggctgc
aagcctctgatccagcaagccatggccaagatcatgaaggcaaaccccgccctctatgtc
cttcgggagagaatccgcaaaggtcttcagctgtactcctcagaacccactgagccgtac
ctgtcctcccagaactacggagaactcttctccaaccagatcatctggtttgtggatgat
accaatgtgtacagagtcaccattcacaagacctttgagggtaacttgaccaccaagccc
atcaacggagccatcttcatcttcaatcctaggactggtcaactcttcctgaagatcatc
cacacctctgtgtgggcaggacagaaacgtcttggtcagcttgccaaatggaagactgca
gaagaagtggctgccctgattaggtccttacccgttgaggaacaacctaagcagatcatt
gttaccaggaaaggcatgttggaccctctggaggttcacttgctggatttccctaacatc
gtcatcaagggcagtgagttgcagcttcccttccaggcttgtttgaaggttgagaagttt
ggagatctgatcctgaaggctaccgagcctcagatggtgctcttcaatctctatgatgac
tggctcaagaccatctcctcctacacagccttctcacgtctgatcctgatcctgagagca
ctgcacgtcaacaatgaccgcaccaaggtaatcctcaagccagacaagaccacaataact
gaaccacatcatatctggcctacacttaccgatgaagaatggatcaaggtggaagtggcc
ctcaaggacctcatcttgaatgactatggaaagaaaaacaatgtgaacgtagcctccttg
acacagtctgagatccgtgatatcatcttgggtatggagatctctgcaccatcccagcaa
cgtcagcagatcgccgagattgagaagcagaccaaggaacaatctcagcttacggccact
acaaccaggaccgtcaataaacatggtgacgaaatcatcacctccaccaccagcaactac
gaaacctcaacgttctcctccaagacggagtggcgtgtcagagccatctcggccaccaac
ctccatctcaggaccaaccacatctacgtgtcatcggatgacatcaaggaaacgggttat
acctacatcctgcccaagaacgtcctcaagaaattcatcattatatcggacttgagagcc
cagattgcgggctacctgtatggagtgtctccccaggacaacccccaggtcaaagagatc
cgatgcatcgtgatggtacctcagtggggcacccatcagaccgttcatctacccaaccag
ctccctgaccatgaattcctcaaggagatggagccgcttggttggatccacacccaaccc
aacgagcttcctcagctctcgccccaagacgtcactacccacgctaagatcatggccgat
aaccccatgtgggatggagagaagacggtcatcatcacatccagcttcacaccaggctca
tgctccttgactgcctacaagctgactccgagtggttacgactggggtagacagaacacg
gacaagggcaacaaccccaagggatacatgccatcccactacgagagggttcagatgctg
ctctctgaccggttcctgggcttcttcatggtcccggctcaaggctcctggaacttcaac
ttcatgggtgtgaggcacgaccccaacatgcgattcgacctccacctggccaaccccaag
gagttctaccacgaggtgcatcgaccatctcacttcctcaacttcagctccctagaggat
gtggacaacatgaacagcgatagagaggatctctacaagtag
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integrated database retrieval system
