Lytechinus pictus (painted urchin): 129254373
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Entry
129254373 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04142
Lysosome
lpic04144
Endocytosis
lpic05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129254373
04142 Lysosome
129254373
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129254373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129254373
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpic04147
]
129254373
Membrane trafficking [BR:
lpic04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
129254373
Exosome [BR:
lpic04147
]
Exosomal proteins
Proteins found in most exosomes
129254373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
DUF3447
Motif
Other DBs
NCBI-GeneID:
129254373
NCBI-ProteinID:
XP_054748808
LinkDB
All DBs
Position
2:complement(47494509..47537757)
Genome browser
AA seq
1696 aa
AA seq
DB search
MSQVLPIRFQEHLQLQNLGINAANIGFSTLTMESDKYICVREKVGEQAQVVIIDLNDSAN
PIRRPISADSAIMNPASKVIALKAGRTLQIFNIEMKSKMKAHTMTEDVTFWKWINVNTIG
LVTDTTVYHWGMEGDSQPIKAFDRHSSLVACQIINYRTDAKMQWLILIGISAQIGKDQES
ATQQNRVVGAMQLYSVERKVSQPIEGHAACFTSFKMENNPELSTLFCFGVRGAAGGKLHI
IEVGSPASGNQPFTKKAVELFFPPEAQSDFPVAMQVSPKHNVIFLITKYGYVHLYDVETA
TCIYMNRISGETIFVTAAHEATDGIIGVNRKGQVLTVSVDEEHIVPYITNNLQNPDLALR
LAVRNNLSGAEDLFVRKFNNLFQQGNYSEAAKVAANAPKGILRTPQTIQRFQQVPTQQGQ
TSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAH
DPTLALSVYLRASVPNKVIQCFAETGQFQKIVLYAKKVNFTPDYVFLLRNVMRVNPDQGA
GFAQMLVQDEEPLADINMIVDVFMEQNLVPPCTSFLLDALKNNRPAEGHLQTRLLEMNLL
AAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNAEW
LVNYFGSLSVEDSLECIKAMMTANLRQNLQICVQVATKYHEQLTTTALIDIFETFKSYEG
LFYFLGSIVNFSQDSDVHFKYIQSACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTD
QLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDIIK
SLIMVVRGQFSTDELVEEVEKRNRLKLLLPWLETRIHEGSTEPATHNALAKIYIDSNNNP
ERFLRENQFYDSRVVGKYCEKRDPHLACVAYERGQCDRELINVCNENSLFKSEARYLVRR
RDQELWAEVLQEDNPFRRQLIDQIVQTALSETQDPEDISVTVKAFMTADLPNELIELLEK
IVLENSVFSDHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAIDSELFEEAFA
IFRKFDVNTSAIQVLIEHIKNLDRAYEFAERCNEPDVWSQLAAAQITAGMVKEAIDSYIK
ANDPSTYLEVVQAASDSGNWEDLVRYLQMARKKARDAYVETELIFAFAKTNRLADLEEFI
SGPNHAQIQQVGDRCYNEGMYEAAKLLFNNVSNFARLASTLVHLGEYQAAVDSARKANST
RTWKEVCFSCVDGEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELIQLLEAALGLE
RAHMGMFTELAILYSKYKPSKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEE
YDNAIVTMMTHPTDAWRETHFKDVITKVANIELYYKAIQFYLDYKPMLLNDLLVVLIPRM
DHTRAVGLFEKLKQLPLVKPYLRQVQSHNNKAINDALNDLLIEEEDYQVSXTSCAPDSFQ
NQQCAILNLEKHELIEFXLVAYXXIALIIMCWKQAVELCKKDRLFKDAMQYACESRNIDI
AEELVNWFLEQNNHECFSASLFNCYDLLRPDVILELAWRHDIMNFAMPYMVQVMREYLGK
VDRLAESEKERKEEEQSNENQPLVYNEPQLMITAGPAMAPGMPAGMPPQPGMMPGMVPGM
APGMGMPGAQPGYYGM
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagtattgcccattcgctttcaggagcacttgcagctccagaatctgggtatc
aatgcagccaacatcggattcagcacactgaccatggagtcggacaagtacatctgtgta
agagagaaggttggggagcaggctcaggtagtcatcatcgacctcaatgactctgctaac
cccatcagaagacccatctctgcagactcggccatcatgaaccctgccagcaaagtcatt
gccctcaaagctggtcgcaccctccagatcttcaatattgagatgaagagcaagatgaag
gcccataccatgactgaggacgtcaccttctggaagtggatcaatgtgaacactatcggc
ctggtgacagacaccactgtctaccattggggtatggagggcgactcccagcctatcaag
gcttttgaccgccattctagtctggtcgcttgtcagatcatcaactacaggacagatgcc
aagatgcagtggctgattctcattggtatctcggcacagatcggaaaagatcaggaatcc
gctacgcagcaaaaccgtgttgtaggggcgatgcagttgtattccgttgaacgcaaggtc
agccagccgatcgagggccacgctgcttgtttcacttcttttaagatggagaataacccg
gagctgtctactctcttctgctttggtgtacgtggtgctgcaggaggcaagctgcacatc
attgaagttggttctccagcctcaggcaatcagccattcaccaagaaggctgttgagctc
ttcttcccaccagaagcacagagtgatttccctgtagccatgcaagtgagtcccaaacac
aatgtcatcttcctcatcaccaagtacggctacgtccacctgtacgatgtggagacagca
acctgtatctacatgaaccgtatcagcggtgagaccatcttcgtgactgctgctcacgaa
gctactgatggtatcattggtgtcaacaggaaaggacaggttttgacagttagtgttgat
gaggagcatatcgttccttacatcaccaacaaccttcagaatccagaccttgccctacgt
cttgctgtccgtaacaacctctctggtgctgaagacctctttgtccgcaagttcaacaac
ctgttccagcagggcaactactccgaggctgccaaggtggctgctaatgcaccaaagggt
atcttgaggactcctcagaccatccagaggttccagcaggttcccacccagcaaggccag
acttcacccctcctacaatactttggtatcctgctcgatcagggtcaactcaacaagtac
gagtctctggagctgtgccgcccagtcctgcagcagggacgcaagcagctcctggagaag
tggctcaaggaagacaagcttgaatgcagcgaggaacttggagacttggtgaaagcacat
gaccctaccttggccctctctgtctatctccgtgccagtgtaccaaacaaggttatccaa
tgctttgcggagactggccagttccagaagattgtactgtatgctaagaaggtgaacttc
accccagactatgtgttccttctgcgcaacgtgatgcgggtcaaccctgaccagggagct
ggttttgctcagatgctggtccaggatgaggaaccgcttgctgatatcaatatgatcgtg
gatgtattcatggaacagaacctggtgccgccctgcacttccttcctcctggatgccctg
aagaacaaccgccccgccgaaggtcaccttcagacccgtctccttgagatgaacctcctc
gctgcacctcaggttgccgatgccatcctcggtaaccagatgttcacccactatgaccgt
gcccacatcgcccagctctgtgagaaggctggacttctacagagggcccttgagcactac
acagacctgtatgatatcaagagggctgttgtacacactcatctactcaacgctgagtgg
cttgtcaactactttggctcactgtccgtcgaagactccctggaatgcatcaaagccatg
atgactgccaaccttcgtcagaaccttcagatctgtgtccaggtagccaccaagtaccac
gaacagctgaccaccactgcgctgatcgacatctttgagacattcaagagctacgagggt
ctcttctacttcttgggctctattgtcaacttcagccaagactccgatgtccacttcaaa
tacatccagtctgcttgcaagactggccagatcaaggaagtggagcgaatctgccgagag
agcaactgctacgatcccgagcgtgtcaagaacttcctcaaggaagccaagctcaccgat
cagctccccctcatcatcgtctgtgatcgttttgactttgtccatgaccttgtcctctac
ctgtaccgcaacaacctgcagaagtacattgagatctatgtgcagaaggtgaacccatcc
cgtctgcctgttgtcatcggtggcctgctcgatgtcgactgctcggaggacatcatcaag
agcttgatcatggtggtcaggggacagttttccaccgatgaactggtggaggaggtggag
aagcgtaatcgcctcaagctgctcctgccctggctggagacccgtatccacgagggaagc
actgagccagccacgcacaacgccctggctaagatctacatcgatagcaacaacaaccct
gaacgattcctcagagaaaaccagttttacgatagccgtgtcgtcggcaagtactgcgag
aagcgtgaccctcatctggcctgtgtggcatacgaacgagggcagtgtgaccgagagctc
atcaatgtgtgcaacgagaactccctgttcaagagcgaggcccgctacttggtgagacga
cgggatcaggaactgtgggctgaggtactccaggaagataacccattcaggagacaactc
atcgaccagattgtacaaactgccctgtctgagacccaagatccagaagatatatcagtg
acagtgaaagctttcatgactgctgatctgcctaatgaactgattgaactgctagaaaag
attgtcctggagaactctgtcttcagtgatcacaggaatcttcagaacctgttgatcctg
acggctatcaaggcagatcgtacccgtgtcatggaatacatcaaccgcctggacaactac
gatgctccagatattgcaaacattgctatcgatagcgaactctttgaggaagcgttcgcc
atctttaggaagtttgacgtcaacacgtccgctatccaagtcctaatcgagcatataaag
aatctggaccgggcctacgagtttgcggagaggtgcaacgagcccgacgtgtggagtcag
ttggctgctgcccagatcacggctggcatggtcaaggaggcaattgattcctacatcaag
gctaatgacccctccacctacctggaggttgtacaagctgcttcagactcagggaactgg
gaagacttggtgcgctacttgcagatggcacgcaagaaggcccgcgatgcctacgtcgag
accgaactcatctttgctttcgccaagacgaaccgtcttgctgacctggaagagttcatc
tcgggaccaaaccatgcacagatccaacaggttggtgacaggtgttataatgaaggcatg
tatgaagcagccaagctactcttcaacaatgtctccaactttgctcgtctggcatccacc
cttgtccatctcggtgaataccaggctgccgtcgacagtgctcgcaaggccaacagcaca
cgaacatggaaagaggtgtgcttctcctgcgtggacggcgaggagttccgtctggcccag
atgtgcggtctccacattgtggtccacgccgacgaactcgaagagctcatcaactactac
caggaccggggctactttgaggagctgatccagctcctcgaggcggcgctgggcttggag
cgggcacacatgggcatgttcaccgagttggccatcctctactctaagtacaaaccatcc
aagatgagggagcatctagagctcttctggtcacgtgtcaacattccaaaggtccttcgt
gcagcagagcaagctcatttgtgggcggagctggtgttcctctacgacaagtacgaggaa
tatgataacgccatagtcaccatgatgacccaccctactgatgcatggagagaaacccac
ttcaaagatgtcatcactaaggttgccaacattgagctgtactacaaggccatccaattc
tacctggactacaagcccatgctcctcaacgacctgttggtggtcctcattcctcgcatg
gaccacacccgagccgtcggactctttgaaaagctcaagcaactgccactggtcaaacct
tacctcagacaagtacagagccacaataacaaggcgataaacgatgccctcaatgatctc
ctgatcgaagaggaagactaccaagtatcctgaacatcttgtgcgcccgatagttttcaa
aatcagcagtgcgctatattgaacctagagaaacatgaacttattgaattcncacttgtt
gcttattgataaatagcattgatcatcatgtgctggaagcaagctgttgaactctgcaag
aaggataggttattcaaggatgcaatgcaatacgcatgcgagtcgaggaatatcgacatc
gccgaggagctcgtcaactggttccttgagcagaacaaccacgagtgcttcagcgcatca
ctcttcaactgctacgatctcctgcgtccggacgttatcctggagcttgcgtggaggcac
gacatcatgaactttgccatgccttacatggttcaggtcatgagggaatacttgggaaag
gttgaccgacttgccgagtcagagaaagagaggaaagaagaagagcaatcaaatgaaaac
caacccctcgtatacaatgagccacagctcatgatcaccgctggtcccgccatggcacca
ggtatgccagcagggatgccgcctcaaccaggtatgatgccaggcatggtgcctggcatg
gcaccgggtatgggtatgcccggtgcacaaccaggctactatggtatgtaa
DBGET
integrated database retrieval system
