Lytechinus pictus (painted urchin): 129254438
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Entry
129254438 CDS
T09066
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129254438
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129254438
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
Helicases
129254438
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
129254438
NCBI-ProteinID:
XP_054748877
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All DBs
Position
2:complement(52537707..52553340)
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AA seq
578 aa
AA seq
DB search
MQIIKPTGKLLPQQDIIKALDIFGNNKRSLDETHKRNATKKQKVSAGETVKTSEHDHSKG
SGRTEKIKAIRKRNRIHVQGEDIPDPVETFGELQEEYGLSDDVIQNIMEVGYLAPTPIQM
QAIPILMHRRELLACAPTGSGKTAAFLLPEIHQLKGPQKKGFRAVVLSPTRELSQQTYRE
LMRLSKGSGLRVHTIENGAKAAQKFGPHTAQKFDVLVSTPNRLVYLLQQDPPAIRLNNVE
WLIIDESDKLFEEGKTGFRDQLGIIYQACDSSQVRRAMFSATFAFDVQQWCRMNLDNVVT
VSVGARNTANEKIDQELTFVGSESGKLLAVRNMFSKGFIPPVLVFVQSKERARELFQELI
YDGYNVDVIHSDKTQTQRDNIVKAFRAGKIWVLIATELMGRGIDFKGVNLVINYDFPTSA
VSYIHRIGRTGRAGRNGRAVTFFTEDDAIHLRSIANVMRNAGCPVPDYMLQIRKLSKRKK
RSLERNPVKRDTIRTLPKDELRKAKRKTELMKRKHGKEKPVISESNTEKDQSKDSAPPKS
KRRKGEKKDVIKSEGITEGTSGKKKKQKVKKKKKKPAL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcagattataaaacctactgggaagctgcttccacaacaagacatcattaaagcattg
gatatctttggaaacaacaaaagaagcttggatgaaacacataaaagaaatgccacaaag
aaacagaaagtttctgctggtgagacggttaaaacaagtgaacatgatcattctaaaggg
tctggaagaactgaaaagataaaggcaatccgcaaaaggaatcggatccacgttcaagga
gaggatattcctgacccggtggagacgtttggagagctgcaggaggaatatggtctctct
gatgacgtcatccagaatataatggaggttgggtacctcgcacccacgccaatccagatg
caagccataccaatacttatgcatcgtcgtgagctcctagcatgtgcacccactggctca
ggaaagacagctgcctttctactgccagaaatacatcagctaaagggtccgcagaagaaa
ggtttccgtgctgtggtgctttcgccaacgagggagctctctcaacagacatacagggaa
ttaatgagattatccaagggcagcggactccgcgtacacaccatcgaaaatggggctaag
gcagcgcagaagtttggacctcacactgcacagaaatttgatgtccttgtctcaacaccc
aacagattggtttaccttctccagcaagatcctcctgccatcagattaaataatgttgaa
tggctaattatagatgaatcggacaagcttttcgaggaggggaaaaccggcttcagggat
cagcttggaattatctaccaggcctgtgactcgtctcaagtccgccgtgcaatgttcagc
gcaacctttgccttcgatgtacagcagtggtgcaggatgaacctcgataatgtagtgaca
gtcagtgtcggtgctagaaacacagccaatgaaaaaatcgatcaagaactgacttttgtt
gggagtgaatcgggaaagcttcttgctgtacggaatatgttcagtaagggattcattcct
ccagtcctggtctttgtacagtcaaaagagagggccagagaactgttccaggaactgatc
tatgatggttataatgtagatgtcatccactctgacaagacacaaacacagagggacaac
atcgtgaaggcttttcgagcgggtaagatctgggtgctaattgccaccgaactgatgggg
cgtggcatagacttcaagggcgtcaaccttgtcatcaactatgacttcccaacgtcggca
gtcagttacatccaccggataggacgaacgggaagggcgggtcgcaatggaagggcggtc
accttcttcacagaagatgatgcaattcacttacgaagcattgccaacgtgatgcgtaat
gcgggctgtccagtgcctgattacatgctgcagataaggaaactgtcaaagagaaagaaa
agatccttagagaggaatccagtgaaaagggataccatcagaacactccctaaagatgaa
ctacgcaaggcaaagagaaaaacggagttgatgaaaagaaaacatggcaaggagaaacct
gtcatttcagagagtaatacagagaaggatcaatcaaaagattctgcaccaccgaagtca
aaaaggaggaaaggagaaaagaaagatgtgattaagagtgaaggaatcactgaaggaaca
tcagggaagaagaagaagcaaaaagttaagaaaaagaagaagaaaccagcattatag
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