Lytechinus pictus (painted urchin): 129254583
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Entry
129254583 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like
KO
K26273
protein strawberry notch
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpic03036
]
129254583
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129254583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
129254583
NCBI-ProteinID:
XP_054749054
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All DBs
Position
2:62326321..62365055
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AA seq
1483 aa
AA seq
DB search
MGDSGNPPDLLSAALCESGLSLDDILNPSMEEDDETNSLPADPSSVLAQAMAVSGVEEDE
ESDPLLEMLQHTPSSSNNGPQNVISTARAFTENHQPVTPTSSKQTIVIRQVSAASSTSLT
SPASVLKIISSKPDGQQIVTTKPIILTTTTSEKGQTSSNTLSRLNTIMGGTPLNKQFVKF
LVKPSSPGVQQATKKTIVLNDTAKPPGLTRSYTDSALLKSDGVRTIQTVTKPAGLFNRSS
SPSVIRNGSTIPRSASFQLPRRDDPSVKMKTPFFPSTSQGVNKTLTVTRRHPFRIIDDDD
DDLDDDETLGFADTYANYTPSKLKVGVNHPDAVVETSSLASVQPPNVWYHLSIPESTMDY
GHLSSLQLEAITYACQQHETILPNGTRAGFLIGDGAGVGKGRTVAGVILENYHLGRKRAL
WLSVSNDLKYDAMRDLKDIGAGNIPVHSLNKFKYAKINSTENGHVRKGVIFATYSSLIGE
SQNRSKYRTRLKQILHWCGKDFDGVIVFDECHKAKNLVPTGSSKPTKTGITVLELQKQLP
KARVVYCSATGASEPRNMAYMSRLGIWGKGSAFPDFNAFIQAIERRGVGAMEVVAMDMKL
RGTYLSRQLSFHGVTFKIKEVSLSESFKRIYNKSVKLWHMARDRFQRAAKLMDADQRMCK
SMWGQFWSAHQRFFKYLCIAAKVKHVVKLARDSVKHGKCVVIGLQSTGEARTLDALEEAG
GELNDFVSTARGVFTTLIEKHFPVPDRNKTMSMLGLSFNGNMHGDGYENEQEKKDKKGKK
RKKSGKKWKKKGVTRDWWVEDSESSSGDSEDGSDDDGDPEKKKTKESKRKLEKDDDDGFS
SSSSSYDDSPFLDSDNDEDDFNPFGNSDSDDDPWLNRSGRKSKEPKSKKRKKDKDKKASL
SPSSKSKSNSHGVDSVDSAADNALRALGILPKTPRSLSTDAAATTLQSLSSSVPSATKSS
VLPGMDAYERGRLMRQELMDMLEDLSAELPPNTLDELIDQLGGPDNVAEMTGRKGRVVSH
DNGVQYESRSEFDIPLEILNLTEKRRFMEGDKYVAIISEAASSGISLQADRRVANQKKRV
HITLELPWSADRAVQQFGRTHRSNQVAAPEYVFLISELAGEQRFASIVAKRLESLGALTH
GDRRATESKDLSRFNIDTKYGREALELIMRTILDLDTPIVEPPGGNQFFVEVKKALVGVG
LLSHNEDHDMYFFEKDYNSMPKFLNRLLGMEVDLQNSLFKYFSDTMVTIVSRAKKEGQWD
AGIMDISNERMDIRRIHTDTYVAMSGNATNELHKVGAGRGVXRYMWRQAIDMWSELSHPE
EGFYISQVMKFGRKVAILARFPPSSSSKKSALQLFKPNIGLQSKLETVSDLKLRFRKVLP
DEAKPFWDALYAASESKCAHVFWKGTCKSAMLGLPCDIGLRRRTFYVLSGAVLSVWARVE
EVLRLNPRNGAVMQIIRLKTDKGKLVGKFQFYLFSALSILFRI
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgggagattcaggcaatccaccggatctcttgtctgctgccctctgtgagagtggactt
tcattagatgatatattgaacccgtctatggaggaggatgatgagacaaattctctccca
gctgatcccagcagtgtgttggctcaggccatggctgtcagtggtgttgaggaagacgaa
gaatcagatcctcttctagagatgttacaacatacaccgtcaagctcaaacaatgggcct
cagaatgtaatcagtactgctagggctttcacagagaaccatcagcctgtcactccaaca
tcctccaaacaaaccatagttattcggcaagtgtccgcggcatcgtcaacaagcctcacc
tcaccggccagtgtgctaaagatcatcagcagtaaacctgatggtcagcaaatagtcacc
accaagcccatcattctgaccactacaacatccgagaagggacaaaccagctctaatacc
ttatcaagactcaacacaatcatgggagggacaccattgaacaagcagtttgtcaagttt
ttggttaagccatcaagcccgggtgtgcagcaagcaaccaagaagacgatagtcctcaat
gatactgctaagccaccaggtcttaccagatcatatacagactcggcccttttgaaatca
gatggtgttcgaactattcaaacagtcacaaaaccagcgggtttgtttaacagatcatct
tcaccaagtgtgatcaggaacggatcaactatacctcggtcagcttcttttcaactacca
aggagagatgacccctcagtaaagatgaagacacctttctttccttcaacttcgcaggga
gtaaacaaaacattaactgttacaaggcggcatcccttccgtatcattgatgatgacgat
gatgatttggatgatgatgagaccttaggctttgctgacacctatgcaaattatactccg
agtaaattgaaggttggtgtaaatcaccctgatgctgtcgtagagacgagttcacttgcc
agcgtgcagccccctaatgtatggtatcatctgagtataccagagagcactatggattat
gggcatctatcctcattgcagcttgaagcaatcacgtatgcctgtcagcaacacgagaca
atactgccaaatggaactcgagctggcttccttataggtgatggcgctggtgtagggaaa
ggaagaacagtagcaggggttatccttgagaactatcatcttggcaggaaaagagctctc
tggttgagtgtttcaaacgatctgaaatatgatgctatgagagatctaaaggacataggt
gctggcaatattcctgttcattctctcaacaagttcaagtatgccaaaatcaactcaacg
gagaatggtcatgtgaggaagggcgtcatctttgctacctattcatccctaataggagag
agtcagaaccgtagcaagtatcgcactcgcctcaaacagatcctgcattggtgcggaaag
gactttgatggagttattgtatttgatgagtgtcacaaagccaagaaccttgtacccaca
ggatcatccaagccaacaaagactggtatcacagttctagagctacagaaacaactcccc
aaggccagagtggtatattgcagtgctacaggtgcttctgagcctcgtaacatggcgtac
atgtctcgtcttggtatctgggggaagggttcagctttccccgacttcaatgcattcatc
caagccatagaaagaagaggagttggtgctatggaggtggtggctatggacatgaagctc
agagggacgtacctttcaaggcagcttagttttcatggagttactttcaagatcaaagag
gtgtctctatcggaatcattcaaacgtatctacaacaaatcagtcaagctgtggcacatg
gcgagagacagattccagagggcagccaaattaatggatgctgaccagcgaatgtgcaag
tcaatgtggggtcagttctggtcagctcatcagagattcttcaagtacctctgcatagca
gctaaggtcaagcatgtggtcaagctggccagagactcggtcaaacatggaaagtgtgtt
gtaattggtcttcagtcgactggtgaagcaaggacgttagatgccctagaagaagcagga
ggggaactcaatgattttgtctcgacagcgagaggtgtattcacaacactgatagagaag
cacttccccgtgcctgatcgtaacaagacgatgagtatgctgggactaagcttcaatggt
aacatgcatggtgacggctatgaaaatgagcaagagaagaaggataagaagggaaagaaa
aggaaaaagtcaggcaagaagtggaagaagaaaggagtgaccagagattggtgggttgaa
gacagtgaaagctcatcaggggactctgaagatggcagcgacgatgatggcgacccggag
aagaagaagactaaagagagcaagaggaagttggagaaggatgacgatgatggcttctca
tcttcgtcgtcatcgtacgatgactctcctttcctcgattccgacaacgacgaggatgac
ttcaatccatttggcaactcagattcagacgatgacccctggttaaacaggagtggaagg
aagagcaaagaaccaaaaagcaagaagaggaagaaagataaggataagaaagcttcatta
tctccctcatccaaatctaagagcaactctcatggggtggacagtgttgattccgccgca
gacaacgctttaagagctcttgggatccttccgaagaccccaaggtctctgtccaccgat
gcagcggctactaccctacaaagtctttcatcatcagttccttcagctacaaagagtagt
gtactacctggtatggatgcatatgagagaggaaggctgatgagacaagaactgatggat
atgttagaagatctatcagctgaactacctccaaacactctagatgaactcattgatcaa
ctaggtgggccagataatgtggcagagatgacgggtcgcaagggtcgagtcgtcagccat
gataacggagtccagtatgaatctagaagtgaatttgacattccacttgagatcctcaac
ctgacggagaaaagacgcttcatggaaggggataagtatgtagctatcatctcagaagca
gcaagctcaggtatctcactgcaggctgatagaagagtagccaatcagaagaagagagtg
catataacattagagttaccatggagtgcagatagggctgtgcaacagtttggtcgtact
catagatcaaatcaggttgcagcaccagaatatgtcttcctcatctcagaactagcagga
gaacagagatttgcctccattgttgctaagcgactggaaagtttgggtgcacttactcat
ggtgataggagagctacagaatccaaagatttgagtcgattcaacatcgataccaaatat
ggtcgagaggccttggagctgataatgagaaccattctagaccttgacacacctattgta
gaaccacctggaggaaaccaattctttgttgaagtgaagaaagccttagttggtgttggt
ctcctgtcccacaatgaggaccatgacatgtacttctttgagaaagattacaacagtatg
cccaagttcttgaatcgtctcttaggcatggaagttgatcttcagaattctctcttcaag
tatttcagtgataccatggtcaccattgtatcaagggcaaagaaagagggccagtgggat
gcgggtattatggatataagcaatgagagaatggatatcaggaggatacatactgacaca
tatgtcgctatgtcaggcaatgctacaaatgaactccacaaggttggtgcaggcagagga
gtataaagatatatgtggaggcaggcaatcgacatgtggtcagagctttcacatcctgag
gaaggattttacatctcacaggtgatgaagtttggtcgtaaagtggcgatcctagcccgc
tttcctccatctagctcatctaagaaaagtgccttacagctcttcaaaccaaacattggt
ctgcagagtaaacttgagacagtcagtgatctcaagctacgattcaggaaggtgttacct
gatgaagctaaaccattctgggacgccctctatgccgcctcggagagcaagtgtgctcat
gtcttctggaaaggaacgtgcaagtcagccatgcttggtctaccatgtgacattggtcta
agacgtcgtaccttctatgttctatctggtgctgtattgagtgtatgggcgagggtagag
gaggtcctacgtctcaatcctaggaacggtgctgtcatgcagattatacgtctcaagact
gacaaaggaaagcttgttggtaagtttcaattttacttgttttctgctttatccattctt
ttcagaatctag
DBGET
integrated database retrieval system
