KEGG   Lytechinus pictus (painted urchin): 129254665
Entry
129254665         CDS       T09066                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
lpic  Lytechinus pictus (painted urchin)
Pathway
lpic03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lpic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129254665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpic03019]
    129254665
   03041 Spliceosome [BR:lpic03041]
    129254665
Messenger RNA biogenesis [BR:lpic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     129254665
Spliceosome [BR:lpic03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129254665
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_DCAF12 WDR54 PQQ_3 Beta-prop_Vps41 eIF2A DUF7099
Other DBs
NCBI-GeneID: 129254665
NCBI-ProteinID: XP_054749144
LinkDB
Position
2:complement(66619997..66634798)
AA seq 337 aa
MALSYEEQILKEKKQLHMSVFAQCISPDGKYLLAGNNYGTIAVFSMRCALSSDANENSRK
PIFTFKAFDGAIFALQSTENFLICGGSGDIKAWKWKDIQQKAPRVAWSLSVPHSANFGAV
ETNGLAYNRQDNTLYSGGGDSELHVWDLESGTCKHSYTDHTDYIHAVALFNTSAQVASGS
EDGTVRIWDTRTSGEPVAILEPNKHEECINNPKDKWISCVAVDPADDWLICGGGPSLSLW
HLRSLSPTTIFEAPKCQPHVVLYHDDAVISAGTSPNIYHWHVNGDSKLTTPCTAMDVYSV
VINTESEANKVLCASGASSKIDVYTNFGYKAFSLDFC
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggctttgtcttatgaggagcaaattttgaaggagaaaaaacagcttcacatgtcagtg
tttgcacaatgtatatcaccagatggcaagtacctactagctgggaacaactatgggaca
attgctgtcttcagtatgcgttgtgcactatcatcagatgcaaatgaaaacagcaggaaa
cctatcttcacattcaaagcctttgatggtgccatatttgctctgcagtctactgaaaac
tttttgatctgtggtggaagtggagatatcaaagcttggaaatggaaggatattcaacag
aaggcaccaagggtagcatggtcactctctgtaccacactcagcaaactttggagctgta
gaaaccaatggacttgcatataatcggcaggacaacactttgtattctggtggaggtgac
agtgaattgcatgtgtgggacttagaatcaggtacatgtaagcattcttatacagaccat
acagactacatccatgctgtagcattgtttaatacatcagcacaggttgcctcagggtct
gaagatggaacagtcaggatatgggatactaggacatcaggggaacccgtagccatctta
gaaccaaacaaacatgaggaatgcatcaataatccaaaagataaatggataagctgtgta
gcagtagatcctgcagatgactggctgatctgtggtggtggaccatcattaagtctttgg
catttgagatcactctctcctaccactatttttgaagcaccaaaatgtcagccacatgta
gttctttatcatgatgatgctgtaatctcagcagggacgtctccaaatatctatcactgg
catgtgaatggtgattctaaacttaccacaccttgtacagctatggatgtgtatagtgtg
gtcatcaacacagagtcagaggctaataaggtactgtgtgcttcaggggcaagttccaag
attgatgtctacacaaactttggttacaaggcattctctttggacttctgctga

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